STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46926.1COG:COG3732: Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism]; Pfam:PF03612:Sorbitol phosphotransferase enzyme II, N-terminal; Pfam:PF03612:Sorbitol phosphotransferase enzyme II, N-terminal; ProSiteProfiles:PS51102:Sorbitol phosphotransferase enzyme II, N-terminal. (365 aa)    
Predicted Functional Partners:
AHY46925.1
EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component; TIGRFAM:TIGR00821:Phosphotransferase system, enzyme II sorbitol-specific factor; COG:COG3730: Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism]; Pfam:PF03608:Phosphotransferase system, enzyme II sorbitol-specific factor; PIRSF:PIRSF038321:Phosphotransferase system, enzyme II sorbitol-specific factor; ProSiteProfiles:PS51107:Phosphotransferase system, enzyme II sorbitol-specific factor.
 
 0.999
AHY46927.1
COG:COG3731: Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism]; Pfam:PF03829:Phosphotransferase system, glucitol/sorbitol-specific IIA component; Pfam:PF03829:Phosphotransferase system, glucitol/sorbitol-specific IIA component; ProSiteProfiles:PS51097:Phosphotransferase system, glucitol/sorbitol-specific IIA component; SUPERFAMILY:SSF141530:No Description.
 
 
 0.998
AHY46924.1
COG:COG4578: Glucitol operon activator [Transcription]; Pfam:PF06923:Glucitol operon activator.
 
  
 0.955
AHY46935.1
Phosphocarrier, HPr family; TIGRFAM:TIGR01003:Phosphotransferase system, phosphocarrier HPr protein; COG:COG1925: Phosphotransferase system HPr-related proteins [Carbohydrate transport and metabolism]; Pfam:PF00381:Phosphotransferase system, phosphocarrier HPr protein; PRINTS:PR00107:Phosphotransferase system, phosphocarrier HPr protein; ProSiteProfiles:PS51350:Phosphotransferase system, phosphocarrier HPr protein-like; SUPERFAMILY:SSF55594:Phosphotransferase system, phosphocarrier HPr protein-like; PTS_HPr_family.
    
 0.905
AHY46928.1
COG:COG4091: Predicted homoserine dehydrogenase [Amino acid transport and metabolism]; Pfam:PF03447:Aspartate/homoserine dehydrogenase, NAD-binding; Pfam:PF03447:Aspartate/homoserine dehydrogenase, NAD-binding; SUPERFAMILY:SSF51735:No Description.
 
    0.896
AHY46929.1
COG:COG2390: Transcriptional regulator contains sigma factor-related N-terminal domain [Transcription]; Pfam:PF04198:Sugar-binding domain, putative; Pfam:PF04198:Sugar-binding domain, putative; SUPERFAMILY:SSF100950:No Description.
 
     0.859
AHY47757.1
COG:COG4091: Predicted homoserine dehydrogenase [Amino acid transport and metabolism]; Pfam:PF03447:Aspartate/homoserine dehydrogenase, NAD-binding; Pfam:PF03447:Aspartate/homoserine dehydrogenase, NAD-binding; SUPERFAMILY:SSF51735:No Description.
 
    0.735
AHY45636.1
PRD domain; COG:COG3711: Transcriptional antiterminator [Transcription]; Pfam:PF00874:PRD; ProSiteProfiles:PS51372:PRD; SUPERFAMILY:SSF63520:PRD.
 
    0.642
AHY46930.1
COG:COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit [Energy production and conversion]; Pfam:PF00676:Dehydrogenase, E1 component; Pfam:PF00676:Dehydrogenase, E1 component; SUPERFAMILY:SSF52518:No Description.
  
    0.632
AHY46932.1
COG:COG0508: Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component and related enzymes [Energy production and conversion]; Pfam:PF00198:2-oxoacid dehydrogenase acyltransferase, catalytic domain; Pfam:PF00198:2-oxoacid dehydrogenase acyltransferase, catalytic domain; ProSiteProfiles:PS50968:Biotin/lipoyl attachment; SUPERFAMILY:SSF52777:No Description.
  
    0.629
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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