STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46977.1Fusaric acid resistance protein-like; COG:COG4129: Predicted membrane protein [Function unknown]; Pfam:PF13515:Fusaric acid resistance protein-like. (390 aa)    
Predicted Functional Partners:
AHY46240.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
     0.697
AHY45644.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
     0.538
AHY46440.1
Xylose isomerase-like TIM barrel; COG:COG1082: Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]; Pfam:PF01261:Xylose isomerase-like, TIM barrel domain; SUPERFAMILY:SSF51658:Xylose isomerase-like, TIM barrel domain.
  
     0.503
AHY46320.1
COG:COG2047: Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]; Pfam:PF09754:Proteasome assembly chaperone 2; Pfam:PF09754:Proteasome assembly chaperone 2; PIRSF:PIRSF028754:Protein of unknown function DUF774; SUPERFAMILY:SSF159659:No Description.
  
     0.488
AHY46975.1
COG:COG1804: Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]; Pfam:PF02515:CoA-transferase family III; Pfam:PF02515:CoA-transferase family III; SUPERFAMILY:SSF89796:CoA-transferase family III domain; Belongs to the CoA-transferase III family.
       0.466
AHY46976.1
COG:COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]; Pfam:PF12697:Alpha/beta hydrolase family; Pfam:PF12697:Alpha/beta hydrolase family; PRINTS:PR00412:Epoxide hydrolase-like; SUPERFAMILY:SSF53474:No Description.
       0.466
AHY45433.1
AAA domain; COG:COG0572: Uridine kinase [Nucleotide transport and metabolism]; Pfam:PF13207:AAA domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
     0.456
AHY46978.1
COG:COG2608: Copper chaperone [Inorganic ion transport and metabolism]; Pfam:PF00403:Heavy metal-associated domain, HMA; Pfam:PF00403:Heavy metal-associated domain, HMA; ProSiteProfiles:PS50846:Heavy metal-associated domain, HMA; SUPERFAMILY:SSF55008:Heavy metal-associated domain, HMA.
       0.439
AHY47831.1
COG:COG2378: Predicted transcriptional regulator [Transcription]; Pfam:PF13280:WYL domain; Pfam:PF13280:WYL domain; PIRSF:PIRSF016838:No Description.
  
     0.418
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.