STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46981.1AAA domain (dynein-related subfamily); COG:COG0714: MoxR-like ATPases [General function prediction only]; Pfam:PF07728:ATPase, dynein-related, AAA domain; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase. (660 aa)    
Predicted Functional Partners:
AHY46097.1
Von Willebrand factor type A domain; COG:COG1239: Mg-chelatase subunit ChlI [Coenzyme metabolism]; Pfam:PF13519:von Willebrand factor type A domain; ProSiteProfiles:PS50234:von Willebrand factor, type A; SMART:SM00327:von Willebrand factor, type A; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
 
 0.884
AHY46984.1
Oxidoreductase, SDR family; TIGRFAM:TIGR03971:Carveol dehydrogenase; COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; ProSitePatterns:PS00061:Short-chain dehydrogenase/reductase, conserved site; SUPERFAMILY:SSF51735:No Description; SDR_subfam_1.
 
   
 0.851
AHY46983.1
Oxidoreductase, SDR family; TIGRFAM:TIGR03971:Carveol dehydrogenase; COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; ProSitePatterns:PS00061:Short-chain dehydrogenase/reductase, conserved site; SUPERFAMILY:SSF51735:No Description; SDR_subfam_1.
 
   
 0.848
AHY47702.1
COG:COG1721: Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]; Pfam:PF01882:Domain of unknown function DUF58; Pfam:PF01882:Domain of unknown function DUF58.
 
  
 0.827
AHY46982.1
COG:COG0714: MoxR-like ATPases [General function prediction only]; Pfam:PF07728:ATPase, dynein-related, AAA domain; Pfam:PF07728:ATPase, dynein-related, AAA domain; PIRSF:PIRSF002849:ATPase chaperone, AAA-type, MoxR, predicted; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
  
0.798
AHY47701.1
COG:COG1305: Transglutaminase-like enzymes putative cysteine proteases [Amino acid transport and metabolism]; Pfam:PF01841:Transglutaminase-like; SMART:SM00460:Transglutaminase-like; SUPERFAMILY:SSF54001:No Description.
 
  
 0.718
AHY45490.1
TPR repeat; COG:COG3063: Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]; Pfam:PF13414:TPR repeat; ProSiteProfiles:PS50005:Tetratricopeptide repeat; SMART:SM00028:Tetratricopeptide repeat; SUPERFAMILY:SSF48452:No Description.
     
 0.689
AHY47919.1
TIGRFAM:TIGR03962:Mycofactocin, radical SAM peptide maturase; COG:COG0535: Predicted Fe-S oxidoreductases [General function prediction only]; Pfam:PF04055:Radical SAM; PIRSF:PIRSF037420:Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ; SUPERFAMILY:SSF102114:No Description; mycofact_rSAM.
 
    0.660
AHY46985.1
Tetracyclin repressor, C-terminal all-alpha domain; COG:COG1309: Transcriptional regulator [Transcription]; Pfam:PF02909:Tetracycline transcriptional regulator, TetR, C-terminal; PRINTS:PR00400:Tetracycline transcriptional regulator, TetR; ProSiteProfiles:PS50977:DNA-binding HTH domain, TetR-type; SUPERFAMILY:SSF48498:Tetracycline transcriptional regulator, TetR-related, C-terminal.
  
    0.509
AHY46095.1
TIGRFAM:TIGR02257:Cobaltochelatase, CobN subunit; COG:COG1429: Cobalamin biosynthesis protein CobN and related Mg-chelatases [Coenzyme metabolism]; Pfam:PF02514:CobN/magnesium chelatase;KEGG: 00860; UniPathway: UPA00148; cobalto_cobN.
  
 
 0.499
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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