STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47004.1COG:COG0726: Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism]; Pfam:PF01522:Polysaccharide deacetylase; SUPERFAMILY:SSF88713:Glycoside hydrolase/deacetylase, beta/alpha-barrel. (265 aa)    
Predicted Functional Partners:
AHY47007.1
Glycosyl transferases group 1; COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description.
    0.539
AHY47988.1
Glycosyl transferases group 1; COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description.
 
    0.480
AHY47608.1
COG:COG1215: Glycosyltransferases probably involved in cell wall biogenesis [Cell envelope biogenesis outer membrane]; Pfam:PF13641:Glycosyltransferase like family 2; SUPERFAMILY:SSF53448:No Description.
  
  
 0.440
AHY47009.1
COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF13579:Glycosyl transferase 4-like domain; SUPERFAMILY:SSF53756:No Description.
 
    0.438
AHY45783.1
COG:COG1215: Glycosyltransferases probably involved in cell wall biogenesis [Cell envelope biogenesis outer membrane]; Pfam:PF00535:Glycosyl transferase, family 2; SUPERFAMILY:SSF53448:No Description.
  
  
 0.425
AHY47344.1
COG:COG1215: Glycosyltransferases probably involved in cell wall biogenesis [Cell envelope biogenesis outer membrane]; Pfam:PF00535:Glycosyl transferase, family 2; SUPERFAMILY:SSF53448:No Description.
  
  
 0.425
AHY47922.1
TIGRFAM:TIGR03965:Putative mycofactocin biosynthesis glycosyltransferase; COG:COG1215: Glycosyltransferases probably involved in cell wall biogenesis [Cell envelope biogenesis outer membrane]; Pfam:PF00535:Glycosyl transferase, family 2; SUPERFAMILY:SSF53448:No Description; mycofact_glyco.
  
  
 0.425
AHY46622.1
Sulfotransferase family; COG:COG3551: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF13469:Sulfotransferase family; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
  
 0.404
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.