STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47007.1Glycosyl transferases group 1; COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description. (385 aa)    
Predicted Functional Partners:
AHY47006.1
COG:COG2244: Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]; Pfam:PF01943:Polysaccharide biosynthesis protein; Pfam:PF01943:Polysaccharide biosynthesis protein.
 
  
 0.902
AHY47009.1
COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF13579:Glycosyl transferase 4-like domain; SUPERFAMILY:SSF53756:No Description.
 
     0.819
AHY47008.1
Pfam:PF14296:O-antigen polysaccharide polymerase Wzy.
       0.773
AHY45742.1
TIGRFAM:TIGR03025:Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COG:COG2148: Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis outer membrane]; Pfam:PF02397:Bacterial sugar transferase; EPS_sugtrans.
 
  
 0.649
AHY46036.1
COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description.
  
     0.629
AHY47001.1
TIGRFAM:TIGR03022:Undecaprenyl-phosphate galactose phosphotransferase, WbaP; COG:COG2148: Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis outer membrane]; Pfam:PF02397:Bacterial sugar transferase; WbaP_sugtrans.
 
  
 0.620
AHY47011.1
Capsular exopolysaccharide family; TIGRFAM:TIGR01007:Exopolysaccharide synthesis protein; COG:COG0489: ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]; Pfam:PF13614:AAA domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase; eps_fam.
 
  
 0.574
AHY47005.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.550
AHY47004.1
COG:COG0726: Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism]; Pfam:PF01522:Polysaccharide deacetylase; SUPERFAMILY:SSF88713:Glycoside hydrolase/deacetylase, beta/alpha-barrel.
    0.539
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.526
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.