STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tatAtatAE: twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (107 aa)    
Predicted Functional Partners:
tatC
tatC: twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
 
 0.983
tatA-2
tatAE: twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 
0.912
AHY46274.1
mttA/Hcf106 family; COG:COG1826: Sec-independent protein secretion pathway components [Intracellular trafficking and secretion]; Pfam:PF02416:Sec-independent protein translocase protein TatA/B/E.
     
  0.900
guaA
GMP synthase (glutamine-hydrolyzing), C-terminal domain; Catalyzes the synthesis of GMP from XMP.
  
    0.859
AHY47032.1
Tetratricopeptide repeat; COG:COG4235: Cytochrome c biogenesis factor [Posttranslational modification protein turnover chaperones]; Pfam:PF13428:Tetratricopeptide repeat; ProSiteProfiles:PS50005:Tetratricopeptide repeat; SUPERFAMILY:SSF48452:No Description.
  
 
 0.610
hisI
TIGRFAM:TIGR03188:Phosphoribosyl-ATP pyrophosphohydrolase; COG:COG0139: Phosphoribosyl-AMP cyclohydrolase [Amino acid transport and metabolism]; Pfam:PF01502:Phosphoribosyl-AMP cyclohydrolase domain; Hamap:MF_01020:Phosphoribosyl-ATP pyrophosphohydrolase; SUPERFAMILY:SSF141734:No Description;KEGG: 00340; UniPathway: UPA00031; histidine_hisI; In the N-terminal section; belongs to the PRA-CH family.
  
    0.523
AHY47033.1
COG:COG0142: Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]; Pfam:PF00348:Polyprenyl synthetase; Pfam:PF00348:Polyprenyl synthetase; ProSitePatterns:PS00444:Polyprenyl synthetase; SUPERFAMILY:SSF48576:Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
  
  
 0.461
hemL
hemL: glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM:TIGR00713:Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; COG:COG0001: Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]; Pfam:PF00202:Aminotransferase class-III; Hamap:MF_00375:Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; PIRSF:PIRSF000521:No Description; ProSitePatterns:PS00600:Aminotransferase class-III; SUPERFAMILY:SSF53383:Pyridoxal phosphate-dependent transferase;KEGG: 00860; MetaCyc: PWY-5188; UniPathway: UPA00251.
     
 0.454
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
  
    0.446
AHY45944.1
Pfam:PF00643:Zinc finger, B-box; SUPERFAMILY:SSF57845:No Description.
   
 
 0.445
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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