STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47062.1COG:COG2366: Protein related to penicillin acylase [General function prediction only]; Pfam:PF01804:Penicillin amidase-like; Pfam:PF01804:Penicillin amidase-like; PIRSF:PIRSF001227:Penicillin/cephalosporin acylase; SUPERFAMILY:SSF56235:No Description. (796 aa)    
Predicted Functional Partners:
AHY45704.1
COG:COG2367: Beta-lactamase class A [Defense mechanisms]; Pfam:PF13354:Beta-lactamase enzyme family; Pfam:PF13354:Beta-lactamase enzyme family; SUPERFAMILY:SSF56601:Beta-lactamase/transpeptidase-like.
     
  0.900
AHY46921.1
Beta-lactamase enzyme family; COG:COG2367: Beta-lactamase class A [Defense mechanisms]; Pfam:PF13354:Beta-lactamase enzyme family; PRINTS:PR00118:Beta-lactamase, class-A/D; SUPERFAMILY:SSF56601:Beta-lactamase/transpeptidase-like.
     
  0.900
AHY47630.1
COG:COG2367: Beta-lactamase class A [Defense mechanisms]; Pfam:PF13354:Beta-lactamase enzyme family; Pfam:PF13354:Beta-lactamase enzyme family; SUPERFAMILY:SSF56601:Beta-lactamase/transpeptidase-like.
     
  0.900
AHY47061.1
COG:COG0584: Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]; Pfam:PF03009:Glycerophosphoryl diester phosphodiesterase; Pfam:PF03009:Glycerophosphoryl diester phosphodiesterase; SUPERFAMILY:SSF51695:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain.
       0.615
AHY47060.1
COG:COG0499: S-adenosylhomocysteine hydrolase [Coenzyme metabolism]; Pfam:PF05221:Adenosylhomocysteinase; Pfam:PF05221:Adenosylhomocysteinase; PIRSF:PIRSF001109:Adenosylhomocysteinase; SMART:SM00996:Adenosylhomocysteinase; SUPERFAMILY:SSF52283:No Description.
       0.444
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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