STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47098.1gntP: transporter, gluconate:H+ symporter (GntP) family; TIGRFAM:TIGR00791:Gluconate transporter; COG:COG2610: H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]; Pfam:PF02447:Gluconate transporter; PIRSF:PIRSF002746:Gluconate transporter. (447 aa)    
Predicted Functional Partners:
AHY45344.1
TIGRFAM:TIGR00872:6-phosphogluconate dehydrogenase-related protein; COG:COG1023: Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]; Pfam:PF03446:6-phosphogluconate dehydrogenase, NADP-binding; PIRSF:PIRSF000103:Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type; PRINTS:PR00076:6-phosphogluconate dehydrogenase signature; ProSitePatterns:PS00895:3-hydroxyisobutyrate dehydrogenase-related, conserved site; SUPERFAMILY:SSF51735:No Description;KEGG: 00051; KEGG: 00053; KEGG: 00140; KEGG: 00253; KEGG: 00260; KEGG: 00362; KEGG: 00363; KEGG: 00520; KEG [...]
 
  
 0.591
AHY47099.1
COG:COG2154: Pterin-4a-carbinolamine dehydratase [Coenzyme metabolism]; Pfam:PF01329:Transcriptional coactivator/pterin dehydratase; Hamap:MF_00434:Transcriptional coactivator/pterin dehydratase; Pfam:PF01329:Transcriptional coactivator/pterin dehydratase; SUPERFAMILY:SSF55248:Transcriptional coactivator/pterin dehydratase.
       0.539
AHY47873.1
TIGRFAM:TIGR00045:Glycerate kinase; COG:COG1929: Glycerate kinase [Carbohydrate transport and metabolism]; Pfam:PF02595:Glycerate kinase; PIRSF:PIRSF006078:Glycerate kinase; SUPERFAMILY:SSF110738:Glycerate kinase; Belongs to the glycerate kinase type-1 family.
  
  
 0.504
AHY46899.1
COG:COG1070: Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]; Pfam:PF02782:Carbohydrate kinase, FGGY, C-terminal; Pfam:PF02782:Carbohydrate kinase, FGGY, C-terminal; ProSitePatterns:PS00445:Carbohydrate kinase, FGGY, conserved site; SUPERFAMILY:SSF53067:No Description; Belongs to the FGGY kinase family.
 
  
 0.488
hisI
TIGRFAM:TIGR03188:Phosphoribosyl-ATP pyrophosphohydrolase; COG:COG0139: Phosphoribosyl-AMP cyclohydrolase [Amino acid transport and metabolism]; Pfam:PF01502:Phosphoribosyl-AMP cyclohydrolase domain; Hamap:MF_01020:Phosphoribosyl-ATP pyrophosphohydrolase; SUPERFAMILY:SSF141734:No Description;KEGG: 00340; UniPathway: UPA00031; histidine_hisI; In the N-terminal section; belongs to the PRA-CH family.
      
 0.456
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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