STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47101.1Galactokinase; TIGRFAM:TIGR00131:Galactokinase; COG:COG0153: Galactokinase [Carbohydrate transport and metabolism]; Pfam:PF10509:Galactokinase galactose-binding domain; PIRSF:PIRSF000530:Galactokinase; PRINTS:PR00959:Mevalonate/galactokinase; ProSitePatterns:PS00106:Galactokinase, conserved site; SUPERFAMILY:SSF54211:Ribosomal protein S5 domain 2-type fold;KEGG: 00052; KEGG: 00520; MetaCyc: PWY-6317; UniPathway: UPA00214; gal_kin; Belongs to the GHMP kinase family. GalK subfamily. (397 aa)    
Predicted Functional Partners:
AHY47103.1
TIGRFAM:TIGR00209:Galactose-1-phosphate uridyl transferase, class I; COG:COG1085: Galactose-1-phosphate uridylyltransferase [Energy production and conversion]; Pfam:PF01087:Galactose-1-phosphate uridyl transferase, N-terminal; PIRSF:PIRSF000808:Galactose-1-phosphate uridyl transferase, class I; ProSitePatterns:PS00117:Galactose-1-phosphate uridyl transferase, class I His-active site; SUPERFAMILY:SSF54197:HIT-like domain;KEGG: 00052; KEGG: 00520; MetaCyc: PWY-6317; UniPathway: UPA00214; galT_1.
 0.999
AHY47102.1
TIGRFAM:TIGR01179:UDP-glucose 4-epimerase GalE; COG:COG1087: UDP-glucose 4-epimerase [Cell envelope biogenesis outer membrane]; Pfam:PF01370:NAD-dependent epimerase/dehydratase; SUPERFAMILY:SSF51735:No Description;KEGG: 00052; KEGG: 00520; MetaCyc: PWY-6317; UniPathway: UPA00214; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.991
AHY47100.1
COG:COG1525: Micrococcal nuclease (thermonuclease) homologs [DNA replication recombination and repair]; Pfam:PF00565:Staphylococcal nuclease (SNase-like); Pfam:PF00565:Staphylococcal nuclease (SNase-like); ProSitePatterns:PS01123:Thermonuclease active site; ProSiteProfiles:PS51257:Prokaryotic membrane lipoprotein lipid attachment site profile.; SMART:SM00318:Staphylococcal nuclease (SNase-like); SUPERFAMILY:SSF50199:Staphylococcal nuclease (SNase-like), OB-fold.
       0.752
AHY47105.1
BGL: beta-galactosidase; TIGRFAM:TIGR03356:Glycoside hydrolase, family 1, beta-glucosidase; COG:COG2723: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Pfam:PF00232:Glycoside hydrolase, family 1; PRINTS:PR00131:Glycoside hydrolase, family 1; ProSitePatterns:PS00653:Glycoside hydrolase, family 1, active site; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily;KEGG: 00460; KEGG: 00500; KEGG: 00940; MetaCyc: PWY-3121; MetaCyc: PWY-4441; MetaCyc: PWY-5176; MetaCyc: PWY-6002.
 
   
 0.681
AHY47683.1
Oxidoreductase family, NAD-binding Rossmann fold; COG:COG0673: Predicted dehydrogenases and related proteins [General function prediction only]; Pfam:PF01408:Oxidoreductase, N-terminal; SMART:SM00849:Beta-lactamase-like; SUPERFAMILY:SSF51735:No Description.
 
 
 0.639
AHY47128.1
Putative dehydrogenase-related protein; COG:COG0673: Predicted dehydrogenases and related proteins [General function prediction only]; Pfam:PF01408:Oxidoreductase, N-terminal; Pfam:PF01408:Oxidoreductase, N-terminal; SUPERFAMILY:SSF51735:No Description.
 
 
 0.638
AHY47106.1
COG:COG1486: Alpha-galactosidases/6-phospho-beta-glucosidases family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]; Pfam:PF02056:Glycoside hydrolase, family 4; Pfam:PF02056:Glycoside hydrolase, family 4; PRINTS:PR00732:Glycoside hydrolase, family 4; SUPERFAMILY:SSF56327:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal.
 
   
 0.591
AHY47168.1
COG:COG1501: Alpha-glucosidases family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]; Pfam:PF01055:Glycoside hydrolase, family 31; Pfam:PF01055:Glycoside hydrolase, family 31; ProSitePatterns:PS00129:Glycoside hydrolase, family 31; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.543
AHY46936.1
TIGRFAM:TIGR01427:Phosphotransferase system, fructose IIC component; COG:COG1299: Phosphotransferase system fructose-specific IIC component [Carbohydrate transport and metabolism]; Pfam:PF02302:Phosphotransferase system, EIIB component, type 2/3; ProSiteProfiles:PS51099:Phosphotransferase system, EIIB component, type 2; SUPERFAMILY:SSF52794:No Description; PTS_IIC_fructo.
     
 0.531
AHY47107.1
COG:COG0395: ABC-type sugar transport system permease component [Carbohydrate transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
  
    0.531
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.