STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47106.1COG:COG1486: Alpha-galactosidases/6-phospho-beta-glucosidases family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]; Pfam:PF02056:Glycoside hydrolase, family 4; Pfam:PF02056:Glycoside hydrolase, family 4; PRINTS:PR00732:Glycoside hydrolase, family 4; SUPERFAMILY:SSF56327:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal. (445 aa)    
Predicted Functional Partners:
AHY45481.1
Glycosidase; COG:COG0366: Glycosidases [Carbohydrate transport and metabolism]; Pfam:PF00128:Glycosyl hydrolase, family 13, catalytic domain; Pfam:PF00128:Glycosyl hydrolase, family 13, catalytic domain; SMART:SM00642:Glycosyl hydrolase, family 13, subfamily, catalytic domain; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily.
     
 0.906
AHY47112.1
Glycosidase; COG:COG0366: Glycosidases [Carbohydrate transport and metabolism]; Pfam:PF00128:Glycosyl hydrolase, family 13, catalytic domain; Pfam:PF00128:Glycosyl hydrolase, family 13, catalytic domain; SMART:SM00642:Glycosyl hydrolase, family 13, subfamily, catalytic domain; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily.
     
 0.906
AHY47168.1
COG:COG1501: Alpha-glucosidases family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]; Pfam:PF01055:Glycoside hydrolase, family 31; Pfam:PF01055:Glycoside hydrolase, family 31; ProSitePatterns:PS00129:Glycoside hydrolase, family 31; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily; Belongs to the glycosyl hydrolase 31 family.
     
  0.900
AHY47109.1
Bacterial extracellular solute-binding protein; COG:COG1653: ABC-type sugar transport system periplasmic component [Carbohydrate transport and metabolism]; Pfam:PF01547:Bacterial extracellular solute-binding, family 1; ProSiteProfiles:PS51318:Twin-arginine translocation pathway, signal sequence; SUPERFAMILY:SSF53850:No Description.
 
    0.859
AHY47105.1
BGL: beta-galactosidase; TIGRFAM:TIGR03356:Glycoside hydrolase, family 1, beta-glucosidase; COG:COG2723: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism]; Pfam:PF00232:Glycoside hydrolase, family 1; PRINTS:PR00131:Glycoside hydrolase, family 1; ProSitePatterns:PS00653:Glycoside hydrolase, family 1, active site; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily;KEGG: 00460; KEGG: 00500; KEGG: 00940; MetaCyc: PWY-3121; MetaCyc: PWY-4441; MetaCyc: PWY-5176; MetaCyc: PWY-6002.
 
  
 0.805
AHY47107.1
COG:COG0395: ABC-type sugar transport system permease component [Carbohydrate transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
  
    0.746
AHY47108.1
COG:COG1175: ABC-type sugar transport systems permease components [Carbohydrate transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
  
    0.696
AHY47101.1
Galactokinase; TIGRFAM:TIGR00131:Galactokinase; COG:COG0153: Galactokinase [Carbohydrate transport and metabolism]; Pfam:PF10509:Galactokinase galactose-binding domain; PIRSF:PIRSF000530:Galactokinase; PRINTS:PR00959:Mevalonate/galactokinase; ProSitePatterns:PS00106:Galactokinase, conserved site; SUPERFAMILY:SSF54211:Ribosomal protein S5 domain 2-type fold;KEGG: 00052; KEGG: 00520; MetaCyc: PWY-6317; UniPathway: UPA00214; gal_kin; Belongs to the GHMP kinase family. GalK subfamily.
 
   
 0.591
AHY47110.1
COG:COG5578: Predicted integral membrane protein [Function unknown]; Pfam:PF04854:Protein of unknown function DUF624; Pfam:PF04854:Protein of unknown function DUF624.
 
     0.582
AHY47102.1
TIGRFAM:TIGR01179:UDP-glucose 4-epimerase GalE; COG:COG1087: UDP-glucose 4-epimerase [Cell envelope biogenesis outer membrane]; Pfam:PF01370:NAD-dependent epimerase/dehydratase; SUPERFAMILY:SSF51735:No Description;KEGG: 00052; KEGG: 00520; MetaCyc: PWY-6317; UniPathway: UPA00214; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.572
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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