STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47121.1AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase; TIGRFAM:TIGR01930:Thiolase; COG:COG0183: Acetyl-CoA acetyltransferase [Lipid metabolism]; Pfam:PF00108:Thiolase, N-terminal; PIRSF:PIRSF000429:Thiolase; ProSitePatterns:PS00098:Thiolase, acyl-enzyme intermediate active site; SUPERFAMILY:SSF53901:Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)    
Predicted Functional Partners:
AHY47122.1
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COG:COG1250: 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; SUPERFAMILY:SSF51735:No Description;MetaCyc: PWY-1361; MetaCyc: PWY-5109; MetaCyc: PWY-5136; MetaCyc: PWY-5138; MetaCyc: PWY-5789; MetaCyc: PWY-6435; MetaCyc: PWY-735; UniPathway: UPA00659.
 
 0.999
AHY47126.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; ProSitePatterns:PS00073:Acyl-CoA dehydrogenase, conserved site; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
  
 0.962
AHY47839.1
COG:COG1250: 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; PIRSF:PIRSF000105:3-hydroxyacyl-CoA dehydrogenase; SUPERFAMILY:SSF51735:No Description.
 
 0.945
AHY45840.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
  
 0.941
AHY46942.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; ProSitePatterns:PS00072:Acyl-CoA dehydrogenase, conserved site; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
  
 0.941
AHY47372.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF02771:Acyl-CoA dehydrogenase, N-terminal; Pfam:PF02771:Acyl-CoA dehydrogenase, N-terminal; ProSitePatterns:PS00072:Acyl-CoA dehydrogenase, conserved site; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
  
 0.941
AHY47387.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; PIRSF:PIRSF016578:No Description; ProSitePatterns:PS00073:Acyl-CoA dehydrogenase, conserved site; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
  
 0.941
AHY45731.1
COG:COG4799: Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]; Pfam:PF01039:Carboxyl transferase; Pfam:PF01039:Carboxyl transferase; PRINTS:PR01070:Acetyl-CoA carboxylase carboxyl transferase, beta subunit; ProSiteProfiles:PS50980:Acetyl-coenzyme A carboxyltransferase, N-terminal; SUPERFAMILY:SSF52096:No Description.
  
 0.931
AHY46904.1
HMGL-like; COG:COG0119: Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism]; Pfam:PF00682:Pyruvate carboxyltransferase; ProSiteProfiles:PS50991:Pyruvate carboxyltransferase; SUPERFAMILY:SSF51569:No Description.
  
 
 0.918
AHY45737.1
COG:COG4770: Acetyl/propionyl-CoA carboxylase alpha subunit [Lipid metabolism]; Pfam:PF02786:Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Pfam:PF02786:Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; ProSitePatterns:PS00866:Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; ProSiteProfiles:PS50968:Biotin/lipoyl attachment; SMART:SM00878:Biotin carboxylase, C-terminal; SUPERFAMILY:SSF56059:No Description.
  
 0.917
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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