STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47294.1NAD(P)Hquinone oxidoreductase, type IV; TIGRFAM:TIGR01755:Flavoprotein WrbA; COG:COG0655: Multimeric flavodoxin WrbA [General function prediction only]; Pfam:PF03358:NADPH-dependent FMN reductase; ProSiteProfiles:PS50902:Flavodoxin/nitric oxide synthase; SUPERFAMILY:SSF52218:No Description; flav_wrbA; Belongs to the WrbA family. (201 aa)    
Predicted Functional Partners:
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
     
  0.900
AHY47295.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COG:COG2514: Predicted ring-cleavage extradiol dioxygenase [General function prediction only]; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; SUPERFAMILY:SSF54593:No Description.
       0.561
AHY46312.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
    0.556
AHY47296.1
COG:COG1846: Transcriptional regulators [Transcription]; Pfam:PF12802:MarR family; Pfam:PF12802:MarR family; PRINTS:PR00598:Transcription regulator HTH, MarR-type; ProSiteProfiles:PS50995:Transcription regulator HTH, MarR-type; SMART:SM00347:Transcription regulator HTH, MarR-type; SUPERFAMILY:SSF46785:No Description.
  
  
 0.419
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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