Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHY47295.1Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COG:COG2514: Predicted ring-cleavage extradiol dioxygenase [General function prediction only]; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; SUPERFAMILY:SSF54593:No Description. (317 aa)    
Predicted Functional Partners:
AHY46292.1
COG:COG0400: Predicted esterase [General function prediction only]; Pfam:PF12695:Alpha/beta hydrolase family; Pfam:PF12695:Alpha/beta hydrolase family; SUPERFAMILY:SSF53474:No Description.
    0.976
AHY45881.1
COG:COG2514: Predicted ring-cleavage extradiol dioxygenase [General function prediction only]; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; SUPERFAMILY:SSF54593:No Description.
  
  
 0.633
AHY47294.1
NAD(P)Hquinone oxidoreductase, type IV; TIGRFAM:TIGR01755:Flavoprotein WrbA; COG:COG0655: Multimeric flavodoxin WrbA [General function prediction only]; Pfam:PF03358:NADPH-dependent FMN reductase; ProSiteProfiles:PS50902:Flavodoxin/nitric oxide synthase; SUPERFAMILY:SSF52218:No Description; flav_wrbA; Belongs to the WrbA family.
  
    0.565
AHY47296.1
COG:COG1846: Transcriptional regulators [Transcription]; Pfam:PF12802:MarR family; Pfam:PF12802:MarR family; PRINTS:PR00598:Transcription regulator HTH, MarR-type; ProSiteProfiles:PS50995:Transcription regulator HTH, MarR-type; SMART:SM00347:Transcription regulator HTH, MarR-type; SUPERFAMILY:SSF46785:No Description.
     
 0.524
AHY47297.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
    0.519
AHY47298.1
Pfam:PF11236:Protein of unknown function DUF3037.
       0.516
AHY46853.1
COG:COG1143: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion]; Pfam:PF12838:4Fe-4S binding domain; Pfam:PF12838:4Fe-4S binding domain; ProSitePatterns:PS00198:4Fe-4S ferredoxin, iron-sulphur binding, conserved site; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description.
  
  
 0.489
AHY45753.1
TIGRFAM:TIGR00121:Biotin--acetyl-CoA-carboxylase ligase; COG:COG0340: Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]; Pfam:PF03099:Biotin/lipoate A/B protein ligase; SUPERFAMILY:SSF55681:No Description;KEGG: 00780; birA_ligase.
  
    0.453
nuoD
NADH:ubiquinone oxidoreductase 49 kD subunit 7; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
    0.439
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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