Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHY45641.1 | AHY47300.1 | RradSPS_0358 | RradSPS_2017 | COG:COG2909: ATP-dependent transcriptional regulator [Transcription]; Pfam:PF00196:Transcription regulator LuxR, C-terminal; Pfam:PF00196:Transcription regulator LuxR, C-terminal; PRINTS:PR00038:Transcription regulator LuxR, C-terminal; ProSiteProfiles:PS50043:Transcription regulator LuxR, C-terminal; SMART:SM00421:Transcription regulator LuxR, C-terminal; SUPERFAMILY:SSF46894:Signal transduction response regulator, C-terminal effector. | COG:COG2018: Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]; Pfam:PF03259:Dynein light chain-related; Pfam:PF03259:Dynein light chain-related; SMART:SM00960:Dynein light chain-related; SUPERFAMILY:SSF103196:No Description. | 0.534 |
AHY45932.1 | AHY47300.1 | RradSPS_0649 | RradSPS_2017 | Pfam:PF13548:Domain of unknown function DUF4126. | COG:COG2018: Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]; Pfam:PF03259:Dynein light chain-related; Pfam:PF03259:Dynein light chain-related; SMART:SM00960:Dynein light chain-related; SUPERFAMILY:SSF103196:No Description. | 0.400 |
AHY47299.1 | AHY47300.1 | RradSPS_2016 | RradSPS_2017 | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | COG:COG2018: Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]; Pfam:PF03259:Dynein light chain-related; Pfam:PF03259:Dynein light chain-related; SMART:SM00960:Dynein light chain-related; SUPERFAMILY:SSF103196:No Description. | 0.773 |
AHY47300.1 | AHY45641.1 | RradSPS_2017 | RradSPS_0358 | COG:COG2018: Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]; Pfam:PF03259:Dynein light chain-related; Pfam:PF03259:Dynein light chain-related; SMART:SM00960:Dynein light chain-related; SUPERFAMILY:SSF103196:No Description. | COG:COG2909: ATP-dependent transcriptional regulator [Transcription]; Pfam:PF00196:Transcription regulator LuxR, C-terminal; Pfam:PF00196:Transcription regulator LuxR, C-terminal; PRINTS:PR00038:Transcription regulator LuxR, C-terminal; ProSiteProfiles:PS50043:Transcription regulator LuxR, C-terminal; SMART:SM00421:Transcription regulator LuxR, C-terminal; SUPERFAMILY:SSF46894:Signal transduction response regulator, C-terminal effector. | 0.534 |
AHY47300.1 | AHY45932.1 | RradSPS_2017 | RradSPS_0649 | COG:COG2018: Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]; Pfam:PF03259:Dynein light chain-related; Pfam:PF03259:Dynein light chain-related; SMART:SM00960:Dynein light chain-related; SUPERFAMILY:SSF103196:No Description. | Pfam:PF13548:Domain of unknown function DUF4126. | 0.400 |
AHY47300.1 | AHY47299.1 | RradSPS_2017 | RradSPS_2016 | COG:COG2018: Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]; Pfam:PF03259:Dynein light chain-related; Pfam:PF03259:Dynein light chain-related; SMART:SM00960:Dynein light chain-related; SUPERFAMILY:SSF103196:No Description. | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | 0.773 |