STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47309.1Sulfite exporter TauE/SafE; COG:COG0730: Predicted permeases [General function prediction only]; Pfam:PF01925:Transmembrane protein TauE like. (352 aa)    
Predicted Functional Partners:
AHY47308.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.773
AHY47310.1
TIGRFAM:TIGR03169:Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; COG:COG1252: NADH dehydrogenase FAD-containing subunit [Energy production and conversion]; Pfam:PF00070:Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain; SUPERFAMILY:SSF51905:No Description; Nterm_to_SelD.
 
     0.621
AHY47311.1
COG:COG2897: Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]; Pfam:PF00581:Rhodanese-like domain; Pfam:PF00581:Rhodanese-like domain; ProSitePatterns:PS00683:Thiosulphate sulfurtransferase, conserved site; ProSiteProfiles:PS50206:Rhodanese-like domain; SMART:SM00450:Rhodanese-like domain; SUPERFAMILY:SSF52821:Rhodanese-like domain.
       0.469
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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