STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47316.1COG:COG3842: ABC-type spermidine/putrescine transport systems ATPase components [Amino acid transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase; Belongs to the ABC transporter superfamily. (356 aa)    
Predicted Functional Partners:
AHY47320.1
COG:COG1176: ABC-type spermidine/putrescine transport system permease component I [Amino acid transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
 
 
 0.920
AHY47319.1
COG:COG1177: ABC-type spermidine/putrescine transport system permease component II [Amino acid transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
 
  
 0.917
AHY47464.1
COG:COG1132: ABC-type multidrug transport system ATPase and permease components [Defense mechanisms]; Pfam:PF00664:ABC transporter, transmembrane domain; Pfam:PF00664:ABC transporter, transmembrane domain; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
   
0.907
AHY47806.1
TIGRFAM:TIGR01726:Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; COG:COG0765: ABC-type amino acid transport system permease component [Amino acid transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description; HEQRo_perm_3TM.
 
 
 0.885
AHY47317.1
Hypothetical protein; COG:COG0398: Uncharacterized conserved protein [Function unknown]; Pfam:PF09335:SNARE associated Golgi protein; Pfam:PF09335:SNARE associated Golgi protein.
       0.781
AHY46052.1
COG:COG1173: ABC-type dipeptide/oligopeptide/nickel transport systems permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
 
    0.756
AHY46447.1
COG:COG1178: ABC-type Fe3+ transport system permease component [Inorganic ion transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
  
 0.725
AHY47315.1
Putative membrane-bound metal-dependent hydrolase (DUF457); Pfam:PF04307:Protein of unknown function DUF457.
       0.693
AHY47050.1
COG:COG0395: ABC-type sugar transport system permease component [Carbohydrate transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
 
   
 0.610
AHY47108.1
COG:COG1175: ABC-type sugar transport systems permease components [Carbohydrate transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
   
 0.579
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (16%) [HD]
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