STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47330.1Molybdopterin oxidoreductase; COG:COG0243: Anaerobic dehydrogenases typically selenocysteine-containing [Energy production and conversion]; Pfam:PF00384:Molybdopterin oxidoreductase; SMART:SM00926:Molybdopterin oxidoreductase, 4Fe-4S domain; SUPERFAMILY:SSF53706:No Description; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (965 aa)    
Predicted Functional Partners:
AHY47331.1
Polysulfide reductase, NrfD; COG:COG0437: Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion]; Pfam:PF03916:NrfD family; ProSitePatterns:PS00198:4Fe-4S ferredoxin, iron-sulphur binding, conserved site; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description.
 
 0.991
AHY47852.1
4Fe-4S dicluster domain; COG:COG0437: Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion]; Pfam:PF13247:4Fe-4S ferredoxin-type, iron-sulpur binding domain; PIRSF:PIRSF036298:Formate dehydrogenase, iron-sulphur subunit; ProSitePatterns:PS00198:4Fe-4S ferredoxin, iron-sulphur binding, conserved site; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description.
  
 
 0.831
AHY47837.1
COG:COG0069: Glutamate synthase domain 2 [Amino acid transport and metabolism]; Pfam:PF01645:Glutamate synthase, central-C; ProSiteProfiles:PS51278:Glutamine amidotransferase type 2 domain; SUPERFAMILY:SSF51395:No Description;UniPathway: UPA00045.
  
 
 0.789
AHY47863.1
Molybdopterin oxidoreductase Fe4S4 domain; COG:COG3383: Uncharacterized anaerobic dehydrogenase [General function prediction only]; Pfam:PF04879:Molybdopterin oxidoreductase, 4Fe-4S domain; ProSitePatterns:PS00551:Molybdopterin oxidoreductase, molybdopterin cofactor binding site; SMART:SM00926:Molybdopterin oxidoreductase, 4Fe-4S domain; SUPERFAMILY:SSF53706:No Description.
 
  
 0.660
AHY46158.1
COG:COG1035: Coenzyme F420-reducing hydrogenase beta subunit [Energy production and conversion]; Pfam:PF04432:Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal; ProSitePatterns:PS00198:4Fe-4S ferredoxin, iron-sulphur binding, conserved site; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description.
  
 
 0.641
AHY45570.1
Rieske [2Fe-2S] domain; COG:COG0723: Rieske Fe-S protein [Energy production and conversion]; Pfam:PF00355:Rieske [2Fe-2S] iron-sulphur domain; PRINTS:PR00162:Rieske iron-sulphur protein, C-terminal; ProSiteProfiles:PS51296:Rieske [2Fe-2S] iron-sulphur domain; SUPERFAMILY:SSF50022:Rieske [2Fe-2S] iron-sulphur domain.
  
 
 0.626
tuf
EF-Tu: translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.619
AHY47240.1
TIGRFAM:TIGR00485:Translation elongation factor EFTu/EF1A, bacterial/organelle; COG:COG0050: GTPases - translation elongation factors [Translation ribosomal structure and biogenesis]; Pfam:PF00009:Elongation factor, GTP-binding domain; Hamap:MF_00118_B:Translation elongation factor EFTu/EF1A, bacterial/organelle; PRINTS:PR00315:Elongation factor, GTP-binding domain; ProSitePatterns:PS00301:Elongation factor, GTP-binding domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
   
 
 0.619
AHY45857.1
TIGRFAM:TIGR01660:Nitrate reductase, beta subunit; COG:COG1140: Nitrate reductase beta subunit [Energy production and conversion]; Pfam:PF13247:4Fe-4S ferredoxin-type, iron-sulpur binding domain; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description;KEGG: 00910.
   
 
 0.505
AHY45891.1
TIGRFAM:TIGR00229:PAS domain; COG:COG0642: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF02518:Histidine kinase-like ATPase, ATP-binding domain; PRINTS:PR00344:Signal transduction histidine kinase-related protein, C-terminal; ProSiteProfiles:PS50112:PAS domain; SMART:SM00387:Histidine kinase-like ATPase, ATP-binding domain; SUPERFAMILY:SSF55874:Histidine kinase-like ATPase, ATP-binding domain; sensory_box.
    
 
 0.472
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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