STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47336.1COG:COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00501:AMP-dependent synthetase/ligase; Pfam:PF00501:AMP-dependent synthetase/ligase; ProSitePatterns:PS00455:AMP-binding, conserved site; SUPERFAMILY:SSF56801:No Description. (540 aa)    
Predicted Functional Partners:
AHY47335.1
COG:COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00501:AMP-dependent synthetase/ligase; Pfam:PF00501:AMP-dependent synthetase/ligase; ProSitePatterns:PS00455:AMP-binding, conserved site; SUPERFAMILY:SSF56801:No Description.
 
  
 
0.965
AHY45894.1
TIGRFAM:TIGR01746:Thioester reductase domain; COG:COG3320: Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00501:AMP-dependent synthetase/ligase; ProSitePatterns:PS00012:Phosphopantetheine attachment site; ProSiteProfiles:PS50075:Acyl carrier protein-like; SMART:SM00823:Polyketide synthase, phosphopantetheine-binding domain; SUPERFAMILY:SSF56801:No Description.
 
 
0.919
AHY45840.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
 
 
 0.645
AHY47337.1
/NonD: hydrolase CocE/NonD family protein; TIGRFAM:TIGR00976:CocE/NonD hydrolase; COG:COG2936: Predicted acyl esterases [General function prediction only]; Pfam:PF08530:Peptidase S15/CocE/NonD, C-terminal; SMART:SM00939:Peptidase S15/CocE/NonD, C-terminal; SUPERFAMILY:SSF49785:Galactose-binding domain-like.
      0.608
AHY47122.1
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COG:COG1250: 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; SUPERFAMILY:SSF51735:No Description;MetaCyc: PWY-1361; MetaCyc: PWY-5109; MetaCyc: PWY-5136; MetaCyc: PWY-5138; MetaCyc: PWY-5789; MetaCyc: PWY-6435; MetaCyc: PWY-735; UniPathway: UPA00659.
  
 
 0.573
AHY45709.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; PIRSF:PIRSF016578:No Description; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
 
 
 0.552
AHY46917.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; PIRSF:PIRSF016578:No Description; ProSitePatterns:PS00072:Acyl-CoA dehydrogenase, conserved site; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
 
 
 0.552
AHY46942.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; ProSitePatterns:PS00072:Acyl-CoA dehydrogenase, conserved site; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
 
 
 0.552
AHY47126.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; ProSitePatterns:PS00073:Acyl-CoA dehydrogenase, conserved site; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
 
 
 0.552
AHY47372.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF02771:Acyl-CoA dehydrogenase, N-terminal; Pfam:PF02771:Acyl-CoA dehydrogenase, N-terminal; ProSitePatterns:PS00072:Acyl-CoA dehydrogenase, conserved site; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
 
 
 0.552
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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