STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47338.1Peroxiredoxin, Ohr subfamily; TIGRFAM:TIGR03561:Peroxiredoxin, organic hydroperoxide resistance-related; COG:COG1764: Predicted redox protein regulator of disulfide bond formation [Posttranslational modification protein turnover chaperones]; Pfam:PF02566:Peroxiredoxin, OsmC-like protein; SUPERFAMILY:SSF82784:Peroxiredoxin, OsmC-like protein; organ_hyd_perox. (138 aa)    
Predicted Functional Partners:
AHY47337.1
/NonD: hydrolase CocE/NonD family protein; TIGRFAM:TIGR00976:CocE/NonD hydrolase; COG:COG2936: Predicted acyl esterases [General function prediction only]; Pfam:PF08530:Peptidase S15/CocE/NonD, C-terminal; SMART:SM00939:Peptidase S15/CocE/NonD, C-terminal; SUPERFAMILY:SSF49785:Galactose-binding domain-like.
       0.655
AHY47336.1
COG:COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00501:AMP-dependent synthetase/ligase; Pfam:PF00501:AMP-dependent synthetase/ligase; ProSitePatterns:PS00455:AMP-binding, conserved site; SUPERFAMILY:SSF56801:No Description.
       0.520
AHY47335.1
COG:COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00501:AMP-dependent synthetase/ligase; Pfam:PF00501:AMP-dependent synthetase/ligase; ProSitePatterns:PS00455:AMP-binding, conserved site; SUPERFAMILY:SSF56801:No Description.
       0.450
AHY47471.1
COG:COG0656: Aldo/keto reductases related to diketogulonate reductase [General function prediction only]; Pfam:PF00248:NADP-dependent oxidoreductase domain; Pfam:PF00248:NADP-dependent oxidoreductase domain; PRINTS:PR00069:Aldo/keto reductase subgroup; ProSitePatterns:PS00798:Aldo/keto reductase, conserved site; SUPERFAMILY:SSF51430:NADP-dependent oxidoreductase domain.
  
  
 0.445
AHY46468.1
COG:COG0693: Putative intracellular protease/amidase [General function prediction only]; Pfam:PF01965:ThiJ/PfpI; Pfam:PF01965:ThiJ/PfpI; ProSiteProfiles:PS51276:Peptidase C56, PfpI; SUPERFAMILY:SSF52317:No Description.
  
  
 0.405
AHY46478.1
TIGRFAM:TIGR00229:PAS domain; COG:COG4585: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF08448:PAS fold-4; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00065:GAF domain; SUPERFAMILY:SSF55785:PAS domain; sensory_box.
   
  
 0.400
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (26%) [HD]
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