STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47350.1COG:COG2343: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF04248:Protein of unknown function DUF427; Pfam:PF04248:Protein of unknown function DUF427. (170 aa)    
Predicted Functional Partners:
pdxH
pdxH: pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
       0.773
AHY47351.1
COG:COG0251: Putative translation initiation inhibitor yjgF family [Translation ribosomal structure and biogenesis]; Pfam:PF01042:YjgF/Yer057p/UK114 family; Pfam:PF01042:YjgF/Yer057p/UK114 family; SUPERFAMILY:SSF55298:Endoribonuclease L-PSP/chorismate mutase-like.
       0.718
AHY47352.1
COG:COG2816: NTP pyrophosphohydrolases containing a Zn-finger probably nucleic-acid-binding [DNA replication recombination and repair]; Pfam:PF00293:NUDIX hydrolase domain; Pfam:PF00293:NUDIX hydrolase domain; ProSitePatterns:PS00893:NUDIX hydrolase, conserved site; ProSiteProfiles:PS51462:NUDIX hydrolase domain; SUPERFAMILY:SSF55811:NUDIX hydrolase domain-like.
       0.718
AHY47353.1
FAD linked oxidase, C-terminal domain; COG:COG0277: FAD/FMN-containing dehydrogenases [Energy production and conversion]; Pfam:PF02913:FAD-linked oxidase, C-terminal; ProSitePatterns:PS00198:4Fe-4S ferredoxin, iron-sulphur binding, conserved site; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF55103:FAD-linked oxidase-like, C-terminal.
       0.718
AHY47527.1
Nitrogenase component 1 type Oxidoreductase; COG:COG2710: Nitrogenase molybdenum-iron protein alpha and beta chains [Energy production and conversion]; Pfam:PF00148:Nitrogenase/oxidoreductase, component 1; SUPERFAMILY:SSF53807:No Description.
  
     0.577
AHY47346.1
Nodulation protein S (NodS); COG:COG2242: Precorrin-6B methylase 2 [Coenzyme metabolism]; Pfam:PF05401:SAM-dependent methyltransferase, NodS-related; SUPERFAMILY:SSF53335:No Description.
 
     0.565
AHY47344.1
COG:COG1215: Glycosyltransferases probably involved in cell wall biogenesis [Cell envelope biogenesis outer membrane]; Pfam:PF00535:Glycosyl transferase, family 2; SUPERFAMILY:SSF53448:No Description.
 
     0.496
AHY47271.1
Methyltransferase domain; COG:COG2226: Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]; Pfam:PF08241:Methyltransferase type 11; SUPERFAMILY:SSF53335:No Description.
  
     0.478
AHY47528.1
Nitrogenase component 1 type Oxidoreductase; COG:COG2710: Nitrogenase molybdenum-iron protein alpha and beta chains [Energy production and conversion]; Pfam:PF00148:Nitrogenase/oxidoreductase, component 1; SUPERFAMILY:SSF53807:No Description.
  
     0.469
AHY46048.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
     0.447
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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