STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47374.1Polyketide cyclase / dehydrase and lipid transport; COG:COG5637: Predicted integral membrane protein [Function unknown]; Pfam:PF03364:Streptomyces cyclase/dehydrase; SUPERFAMILY:SSF55961:No Description. (215 aa)    
Predicted Functional Partners:
AHY46222.1
COG:COG1063: Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]; Pfam:PF08240:Alcohol dehydrogenase GroES-like; Pfam:PF08240:Alcohol dehydrogenase GroES-like; ProSitePatterns:PS00059:Alcohol dehydrogenase, zinc-type, conserved site; SUPERFAMILY:SSF50129:GroES-like.
 
    0.650
AHY46224.1
COG:COG1063: Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]; Pfam:PF08240:Alcohol dehydrogenase GroES-like; Pfam:PF08240:Alcohol dehydrogenase GroES-like; ProSitePatterns:PS00059:Alcohol dehydrogenase, zinc-type, conserved site; SMART:SM00829:Polyketide synthase, enoylreductase; SUPERFAMILY:SSF50129:GroES-like.
 
    0.637
AHY45410.1
COG:COG4244: Predicted membrane protein [Function unknown]; Pfam:PF09990:Domain of unknown function DUF2231, transmembrane; Pfam:PF09990:Domain of unknown function DUF2231, transmembrane.
  
     0.624
AHY46122.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
     0.516
AHY47373.1
Glyoxalase-like domain; COG:COG0346: Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]; Pfam:PF12681:Glyoxalase-like domain; SUPERFAMILY:SSF54593:No Description.
       0.512
AHY45994.1
FAD binding domain; COG:COG0654: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]; Pfam:PF01494:Monooxygenase, FAD-binding; PRINTS:PR00420:Aromatic-ring hydroxylase-like; SUPERFAMILY:SSF51905:No Description.
  
     0.477
AHY45841.1
COG:COG1233: Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF13450:NAD(P)-binding Rossmann-like domain; Pfam:PF13450:NAD(P)-binding Rossmann-like domain; PRINTS:PR00411:Pyridine nucleotide disulphide reductase class-I signature; SUPERFAMILY:SSF51905:No Description.
  
     0.465
AHY47375.1
COG:COG2409: Predicted drug exporters of the RND superfamily [General function prediction only]; Pfam:PF03176:Membrane transport protein, MMPL type; Pfam:PF03176:Membrane transport protein, MMPL type; ProSiteProfiles:PS50156:Sterol-sensing domain; SUPERFAMILY:SSF82866:No Description.
       0.458
AHY45479.1
TIGRFAM:TIGR02401:Malto-oligosyltrehalose synthase; COG:COG3280: Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism]; Pfam:PF00128:Glycosyl hydrolase, family 13, catalytic domain; SMART:SM00642:Glycosyl hydrolase, family 13, subfamily, catalytic domain; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily;MetaCyc: PWY-2661; trehalose_TreY.
  
    0.439
AHY47620.1
Glycosyl transferases group 1; COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF13692:Glycosyl transferases group 1; SUPERFAMILY:SSF53756:No Description.
  
     0.439
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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