STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47376.1GDSL-like Lipase/Acylhydrolase family; COG:COG2755: Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]; Pfam:PF13472:GDSL-like Lipase/Acylhydrolase family; SUPERFAMILY:SSF52266:No Description. (269 aa)    
Predicted Functional Partners:
AHY47377.1
COG:COG0584: Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]; Pfam:PF03009:Glycerophosphoryl diester phosphodiesterase; Pfam:PF03009:Glycerophosphoryl diester phosphodiesterase; SUPERFAMILY:SSF51695:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain.
  
  
 0.600
AHY46622.1
Sulfotransferase family; COG:COG3551: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF13469:Sulfotransferase family; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
  
 0.566
AHY47834.1
COG:COG1835: Predicted acyltransferases [Lipid metabolism]; Pfam:PF01757:Acyltransferase 3; SUPERFAMILY:SSF52266:No Description.
 
   
 0.557
AHY45753.1
TIGRFAM:TIGR00121:Biotin--acetyl-CoA-carboxylase ligase; COG:COG0340: Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]; Pfam:PF03099:Biotin/lipoate A/B protein ligase; SUPERFAMILY:SSF55681:No Description;KEGG: 00780; birA_ligase.
     
 0.519
AHY46292.1
COG:COG0400: Predicted esterase [General function prediction only]; Pfam:PF12695:Alpha/beta hydrolase family; Pfam:PF12695:Alpha/beta hydrolase family; SUPERFAMILY:SSF53474:No Description.
 
   
 0.460
AHY45447.1
Sulfotransferase family; COG:COG3551: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF13469:Sulfotransferase family; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
  
 0.444
AHY46045.1
COG:COG1670: Acetyltransferases including N-acetylases of ribosomal proteins [Translation ribosomal structure and biogenesis]; Pfam:PF13302:GNAT domain; Pfam:PF13302:GNAT domain; ProSiteProfiles:PS51186:GNAT domain; SUPERFAMILY:SSF55729:Acyl-CoA N-acyltransferase.
  
     0.413
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.