STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47390.1COG:COG1804: Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]; Pfam:PF02515:CoA-transferase family III; Pfam:PF02515:CoA-transferase family III; SUPERFAMILY:SSF89796:CoA-transferase family III domain; Belongs to the CoA-transferase III family. (278 aa)    
Predicted Functional Partners:
AHY47387.1
COG:COG1960: Acyl-CoA dehydrogenases [Lipid metabolism]; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; Pfam:PF00441:Acyl-CoA oxidase/dehydrogenase, type 1; PIRSF:PIRSF016578:No Description; ProSitePatterns:PS00073:Acyl-CoA dehydrogenase, conserved site; SUPERFAMILY:SSF56645:Acyl-CoA dehydrogenase/oxidase.
  
 
 0.805
AHY47389.1
COG:COG1024: Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]; Pfam:PF00378:Crotonase superfamily; Pfam:PF00378:Crotonase superfamily; ProSitePatterns:PS00166:Enoyl-CoA hydratase/isomerase, conserved site; SUPERFAMILY:SSF52096:No Description.
  
 
 0.789
AHY47388.1
AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase; TIGRFAM:TIGR01930:Thiolase; COG:COG0183: Acetyl-CoA acetyltransferase [Lipid metabolism]; Pfam:PF00108:Thiolase, N-terminal; PIRSF:PIRSF000429:Thiolase; ProSitePatterns:PS00737:Thiolase, conserved site; SUPERFAMILY:SSF53901:Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.784
AHY47385.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COG:COG4585: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF02518:Histidine kinase-like ATPase, ATP-binding domain; PRINTS:PR00344:Signal transduction histidine kinase-related protein, C-terminal; ProSiteProfiles:PS50109:Signal transduction histidine kinase, core; SMART:SM00387:Histidine kinase-like ATPase, ATP-binding domain; SUPERFAMILY:SSF55874:Histidine kinase-like ATPase, ATP-binding domain.
       0.542
AHY47386.1
COG:COG2197: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]; Pfam:PF00072:Signal transduction response regulator, receiver domain; Pfam:PF00072:Signal transduction response regulator, receiver domain; PRINTS:PR00038:Transcription regulator LuxR, C-terminal; ProSitePatterns:PS00622:Transcription regulator LuxR, C-terminal; ProSiteProfiles:PS50043:Transcription regulator LuxR, C-terminal; SMART:SM00448:Signal transduction response regulator, receiver domain; SUPERFAMILY:SSF52172:CheY-like superfamily.
       0.542
argH
TIGRFAM:TIGR00838:Argininosuccinate lyase; COG:COG0165: Argininosuccinate lyase [Amino acid transport and metabolism]; Pfam:PF00206:Fumarate lyase, N-terminal; Hamap:MF_00006:Argininosuccinate lyase; PRINTS:PR00145:Delta crystallin; ProSitePatterns:PS00163:Fumarate lyase, conserved site; SUPERFAMILY:SSF48557:L-Aspartase-like;KEGG: 00250; KEGG: 00330; MetaCyc: PWY-4983; MetaCyc: PWY-5; UniPathway: UPA00068.
 
      0.533
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.