STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47422.1COG:COG0667: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion]; Pfam:PF00248:NADP-dependent oxidoreductase domain; Pfam:PF00248:NADP-dependent oxidoreductase domain; SUPERFAMILY:SSF51430:NADP-dependent oxidoreductase domain. (334 aa)    
Predicted Functional Partners:
AHY47423.1
Hypothetical protein; COG:COG3253: Uncharacterized conserved protein [Function unknown]; Pfam:PF06778:Chlorite dismutase; Pfam:PF06778:Chlorite dismutase; SUPERFAMILY:SSF54909:Dimeric alpha-beta barrel.
 
     0.698
AHY47471.1
COG:COG0656: Aldo/keto reductases related to diketogulonate reductase [General function prediction only]; Pfam:PF00248:NADP-dependent oxidoreductase domain; Pfam:PF00248:NADP-dependent oxidoreductase domain; PRINTS:PR00069:Aldo/keto reductase subgroup; ProSitePatterns:PS00798:Aldo/keto reductase, conserved site; SUPERFAMILY:SSF51430:NADP-dependent oxidoreductase domain.
 
 
0.577
AHY47418.1
COG:COG0580: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]; Pfam:PF00230:Major intrinsic protein; Pfam:PF00230:Major intrinsic protein; PRINTS:PR00783:Major intrinsic protein; ProSitePatterns:PS00221:Major intrinsic protein, conserved site; SUPERFAMILY:SSF81338:Aquaporin-like; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.420
AHY47752.1
COG:COG0580: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]; Pfam:PF00230:Major intrinsic protein; Pfam:PF00230:Major intrinsic protein; PRINTS:PR00783:Major intrinsic protein; ProSitePatterns:PS00221:Major intrinsic protein, conserved site; SUPERFAMILY:SSF81338:Aquaporin-like; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.420
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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