STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47467.1COG:COG3546: Mn-containing catalase [Inorganic ion transport and metabolism]; Pfam:PF05067:Manganese catalase; Pfam:PF05067:Manganese catalase; SUPERFAMILY:SSF47240:Ferritin-like superfamily. (296 aa)    
Predicted Functional Partners:
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
  
 0.657
AHY47466.1
Cupin domain; COG:COG1917: Uncharacterized conserved protein contains double-stranded beta-helix domain [Function unknown]; Pfam:PF07883:Cupin 2, conserved barrel; SUPERFAMILY:SSF51182:RmlC-like cupin domain.
 
     0.595
AHY46208.1
Pfam:PF11338:Protein of unknown function DUF3140.
  
     0.525
AHY45613.1
Metallo-beta-lactamase superfamily; COG:COG0491: Zn-dependent hydrolases including glyoxylases [General function prediction only]; Pfam:PF00753:Beta-lactamase-like; SMART:SM00849:Beta-lactamase-like; SUPERFAMILY:SSF56281:No Description.
 
     0.509
AHY47465.1
NADH(P)-binding; COG:COG0451: Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis outer membrane / Carbohydrate transport and metabolism]; Pfam:PF13460:NADH(P)-binding; SUPERFAMILY:SSF51735:No Description.
       0.498
AHY45777.1
COG:COG2244: Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]; Pfam:PF01943:Polysaccharide biosynthesis protein; Pfam:PF01943:Polysaccharide biosynthesis protein.
  
    0.482
AHY47682.1
Hypothetical protein; COG:COG1944: Uncharacterized conserved protein [Function unknown]; Pfam:PF02624:YcaO-like; Pfam:PF02624:YcaO-like.
  
     0.458
AHY47679.1
GlcNAc-PI de-N-acetylase; COG:COG2120: Uncharacterized proteins LmbE homologs [Function unknown]; Pfam:PF02585:N-acetylglucosaminyl phosphatidylinositol deacetylase; SUPERFAMILY:SSF102588:Putative deacetylase LmbE-like domain.
  
     0.437
pckA
pckA: phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
       0.427
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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