STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47509.1Iron dependent repressor, metal binding and dimerization domain; COG:COG1321: Mn-dependent transcriptional regulator [Transcription]; Pfam:PF02742:Iron dependent repressor-like, metal binding and dimerisation domain; ProSiteProfiles:PS50944:Iron dependent repressor, N-terminal; SMART:SM00529:Iron dependent repressor, diptheria toxin type; SUPERFAMILY:SSF47979:Iron dependent repressor-like, metal binding and dimerisation domain. (226 aa)    
Predicted Functional Partners:
AHY47505.1
COG:COG1108: ABC-type Mn2+/Zn2+ transport systems permease components [Inorganic ion transport and metabolism]; Pfam:PF00950:ABC-3; Pfam:PF00950:ABC-3; SUPERFAMILY:SSF81345:No Description.
  
 0.963
AHY45385.1
Pfam:PF07670:Nucleoside recognition Gate;Reactome: REACT_15518; Reactome: REACT_1698.
  
  
 0.939
AHY47508.1
COG:COG0803: ABC-type metal ion transport system periplasmic component/surface adhesin [Inorganic ion transport and metabolism]; Pfam:PF01297:Periplasmic solute binding protein family; Pfam:PF01297:Periplasmic solute binding protein family; PRINTS:PR00690:Adhesion lipoprotein; SUPERFAMILY:SSF53807:No Description; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.776
AHY47507.1
COG:COG1121: ABC-type Mn/Zn transport systems ATPase component [Inorganic ion transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
  
 0.744
AHY46980.1
Heavy metal translocating P-type ATPase; TIGRFAM:TIGR01525:Cation-transporting P-type ATPase, subfamily IB; COG:COG2217: Cation transport ATPase [Inorganic ion transport and metabolism]; Pfam:PF00122:P-type ATPase, A domain; PRINTS:PR00119:Cation-transporting P-type ATPase; ProSitePatterns:PS01047:Heavy-metal-associated, conserved site; ProSiteProfiles:PS50846:Heavy metal-associated domain, HMA; SUPERFAMILY:SSF56784:HAD-like domain; ATPase-IB_hvy.
     
 0.673
AHY47506.1
COG:COG1108: ABC-type Mn2+/Zn2+ transport systems permease components [Inorganic ion transport and metabolism]; Pfam:PF00950:ABC-3; Pfam:PF00950:ABC-3; SUPERFAMILY:SSF81345:No Description.
 
  
 0.670
AHY46478.1
TIGRFAM:TIGR00229:PAS domain; COG:COG4585: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF08448:PAS fold-4; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00065:GAF domain; SUPERFAMILY:SSF55785:PAS domain; sensory_box.
 
  
 0.651
AHY47774.1
COG:COG0428: Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]; Pfam:PF02535:Zinc/iron permease; Pfam:PF02535:Zinc/iron permease.
  
  
 0.637
AHY45769.1
COG:COG0672: High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]; Pfam:PF03239:Iron permease FTR1; Pfam:PF03239:Iron permease FTR1.
     
 0.631
AHY47571.1
CDF: cation diffusion facilitator family transporter; TIGRFAM:TIGR01297:Cation efflux protein; COG:COG0053: Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]; Pfam:PF01545:Cation efflux protein; SUPERFAMILY:SSF161111:No Description; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.625
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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