STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47527.1Nitrogenase component 1 type Oxidoreductase; COG:COG2710: Nitrogenase molybdenum-iron protein alpha and beta chains [Energy production and conversion]; Pfam:PF00148:Nitrogenase/oxidoreductase, component 1; SUPERFAMILY:SSF53807:No Description. (454 aa)    
Predicted Functional Partners:
AHY47528.1
Nitrogenase component 1 type Oxidoreductase; COG:COG2710: Nitrogenase molybdenum-iron protein alpha and beta chains [Energy production and conversion]; Pfam:PF00148:Nitrogenase/oxidoreductase, component 1; SUPERFAMILY:SSF53807:No Description.
 
 0.999
AHY46097.1
Von Willebrand factor type A domain; COG:COG1239: Mg-chelatase subunit ChlI [Coenzyme metabolism]; Pfam:PF13519:von Willebrand factor type A domain; ProSiteProfiles:PS50234:von Willebrand factor, type A; SMART:SM00327:von Willebrand factor, type A; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
  
 0.919
AHY46095.1
TIGRFAM:TIGR02257:Cobaltochelatase, CobN subunit; COG:COG1429: Cobalamin biosynthesis protein CobN and related Mg-chelatases [Coenzyme metabolism]; Pfam:PF02514:CobN/magnesium chelatase;KEGG: 00860; UniPathway: UPA00148; cobalto_cobN.
 
  
 0.815
AHY46014.1
COG:COG1562: Phytoene/squalene synthetase [Lipid metabolism]; Pfam:PF00494:Squalene/phytoene synthase; Pfam:PF00494:Squalene/phytoene synthase; ProSitePatterns:PS01045:Squalene/phytoene synthase, conserved site; SUPERFAMILY:SSF48576:Terpenoid synthase.
 
    0.723
AHY46015.1
TIGRFAM:TIGR02734:Phytoene desaturase CrtI family; COG:COG1233: Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01593:Amine oxidase; PRINTS:PR00419:Adrenodoxin reductase family signature; SUPERFAMILY:SSF51905:No Description; crtI_fam.
 
    0.641
AHY47290.1
COG:COG1233: Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF13450:NAD(P)-binding Rossmann-like domain; Pfam:PF13450:NAD(P)-binding Rossmann-like domain; SUPERFAMILY:SSF51905:No Description.
 
    0.619
AHY47529.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.613
AHY47350.1
COG:COG2343: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF04248:Protein of unknown function DUF427; Pfam:PF04248:Protein of unknown function DUF427.
  
     0.577
AHY47816.1
Alpha/beta hydrolase family; COG:COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]; Pfam:PF12697:Alpha/beta hydrolase family; SUPERFAMILY:SSF53474:No Description.
  
    0.562
AHY46131.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60; SUPERFAMILY:SSF53474:No Description.
  
     0.536
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.