Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHY47600.1 | menD | RradSPS_2317 | RradSPS_2315 | Sortase; TIGRFAM:TIGR01076:Sortase family; COG:COG3764: Sortase (surface protein transpeptidase) [Cell envelope biogenesis outer membrane]; Pfam:PF04203:Sortase family; SUPERFAMILY:SSF63817:Sortase domain; sortase_fam. | menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.474 |
| AHY47600.1 | menF | RradSPS_2317 | RradSPS_2316 | Sortase; TIGRFAM:TIGR01076:Sortase family; COG:COG3764: Sortase (surface protein transpeptidase) [Cell envelope biogenesis outer membrane]; Pfam:PF04203:Sortase family; SUPERFAMILY:SSF63817:Sortase domain; sortase_fam. | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.474 |
| menD | AHY47600.1 | RradSPS_2315 | RradSPS_2317 | menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | Sortase; TIGRFAM:TIGR01076:Sortase family; COG:COG3764: Sortase (surface protein transpeptidase) [Cell envelope biogenesis outer membrane]; Pfam:PF04203:Sortase family; SUPERFAMILY:SSF63817:Sortase domain; sortase_fam. | 0.474 |
| menD | menF | RradSPS_2315 | RradSPS_2316 | menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.998 |
| menF | AHY47600.1 | RradSPS_2316 | RradSPS_2317 | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | Sortase; TIGRFAM:TIGR01076:Sortase family; COG:COG3764: Sortase (surface protein transpeptidase) [Cell envelope biogenesis outer membrane]; Pfam:PF04203:Sortase family; SUPERFAMILY:SSF63817:Sortase domain; sortase_fam. | 0.474 |
| menF | menD | RradSPS_2316 | RradSPS_2315 | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.998 |