STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47614.1COG:COG3119: Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]; Pfam:PF00884:Sulfatase; Pfam:PF00884:Sulfatase; SUPERFAMILY:SSF53649:Alkaline-phosphatase-like, core domain. (447 aa)    
Predicted Functional Partners:
AHY46027.1
Sulfatase; COG:COG1368: Phosphoglycerol transferase and related proteins alkaline phosphatase superfamily [Cell envelope biogenesis outer membrane]; Pfam:PF00884:Sulfatase; SUPERFAMILY:SSF53649:Alkaline-phosphatase-like, core domain.
  
     0.760
AHY47613.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.709
AHY47460.1
TIGRFAM:TIGR03440:Ergothioneine biosynthesis protein EgtB; COG:COG1262: Uncharacterized conserved protein [Function unknown]; Pfam:PF03781:Formylglycine-generating sulphatase enzyme domain; SUPERFAMILY:SSF56436:C-type lectin fold; egtB_TIGR03440.
 
   0.577
AHY47611.1
Pfam:PF13469:Sulfotransferase family; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
       0.540
AHY47612.1
Polysaccharide biosynthesis protein; COG:COG2244: Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]; Pfam:PF01943:Polysaccharide biosynthesis protein.
       0.534
AHY47128.1
Putative dehydrogenase-related protein; COG:COG0673: Predicted dehydrogenases and related proteins [General function prediction only]; Pfam:PF01408:Oxidoreductase, N-terminal; Pfam:PF01408:Oxidoreductase, N-terminal; SUPERFAMILY:SSF51735:No Description.
 
    0.437
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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