STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47648.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (152 aa)    
Predicted Functional Partners:
AHY47649.1
COG:COG0243: Anaerobic dehydrogenases typically selenocysteine-containing [Energy production and conversion]; Pfam:PF00384:Molybdopterin oxidoreductase; Pfam:PF00384:Molybdopterin oxidoreductase; ProSitePatterns:PS00490:Molybdopterin oxidoreductase, prokaryotic, conserved site; SMART:SM00926:Molybdopterin oxidoreductase, 4Fe-4S domain; SUPERFAMILY:SSF53706:No Description; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     0.994
AHY47647.1
HPP family; COG:COG3448: CBS-domain-containing membrane protein [Signal transduction mechanisms]; Pfam:PF04982:HPP.
       0.791
AHY47864.1
Molybdopterin oxidoreductase; COG:COG3383: Uncharacterized anaerobic dehydrogenase [General function prediction only]; Pfam:PF00384:Molybdopterin oxidoreductase; SUPERFAMILY:SSF53706:No Description; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     0.555
AHY47270.1
Pfam:PF01814:Haemerythrin/HHE cation-binding motif.
  
     0.536
AHY47650.1
COG:COG0589: Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]; Pfam:PF00582:UspA; PRINTS:PR01438:Universal stress protein A; ProSiteProfiles:PS50903:Rubredoxin-like domain; SUPERFAMILY:SSF52402:No Description.
       0.464
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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