STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47671.1Pfam:PF11866:Protein of unknown function DUF3386. (237 aa)    
Predicted Functional Partners:
AHY47672.1
Flavodoxin; COG:COG0369: Sulfite reductase alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]; Pfam:PF00258:Flavodoxin/nitric oxide synthase; PRINTS:PR00369:Flavodoxin; ProSiteProfiles:PS50902:Flavodoxin/nitric oxide synthase; SUPERFAMILY:SSF52218:No Description.
       0.776
AHY47287.1
COG:COG4398: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF08495:FIST domain, N-terminal; Pfam:PF08495:FIST domain, N-terminal; PIRSF:PIRSF018953:Uncharacterised conserved protein UCP018953; SMART:SM00897:FIST domain, N-terminal.
  
     0.470
AHY45346.1
COG:COG3429: Glucose-6-P dehydrogenase subunit [Carbohydrate transport and metabolism]; Pfam:PF10128:Glucose-6-phosphate dehydrogenase assembly protein OpcA; Pfam:PF10128:Glucose-6-phosphate dehydrogenase assembly protein OpcA.
  
     0.422
AHY47673.1
COG:COG1120: ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
       0.422
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.