STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47719.1COG:COG1116: ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component [Inorganic ion transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase. (266 aa)    
Predicted Functional Partners:
AHY47717.1
COG:COG0715: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components [Inorganic ion transport and metabolism]; Pfam:PF09084:NMT1/THI5-like; Pfam:PF09084:NMT1/THI5-like; ProSiteProfiles:PS51318:Twin-arginine translocation pathway, signal sequence; SUPERFAMILY:SSF53850:No Description.
  
 0.999
AHY47718.1
COG:COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Inorganic ion transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description.
  
 0.995
AHY47720.1
TIGRFAM:TIGR02357:Thiamine transporter ThiT/YuaJ; COG:COG3859: Predicted membrane protein [Function unknown]; Pfam:PF09515:Thiamine transporter ThiT/YuaJ; thia_yuaJ.
       0.778
AHY46053.1
TIGRFAM:TIGR01727:Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; COG:COG0444: ABC-type dipeptide/oligopeptide/nickel transport system ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Pfam:PF08352:Oligopeptide/dipeptide ABC transporter, C-terminal; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase; oligo_HPY; Belongs to the ABC transporter superfamily.
 
     
0.593
AHY47975.1
ATPase family associated with various cellular activities (AAA); COG:COG1222: ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification protein turnover chaperones]; Pfam:PF00004:ATPase, AAA-type, core; ProSitePatterns:PS00674:ATPase, AAA-type, conserved site; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
    0.586
thiM
thiM: hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
     
 0.554
AHY47716.1
TIGRFAM:TIGR00097:Phosphomethylpyrimidine kinase type-2; COG:COG0351: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]; Pfam:PF08543:Phosphomethylpyrimidine kinase type-1; SUPERFAMILY:SSF53613:No Description;KEGG: 00730; UniPathway: UPA00060; HMP-P_kinase.
       0.532
AHY47714.1
thiW: thiW protein; TIGRFAM:TIGR02359:ThiW; COG:COG4732: Predicted membrane protein [Function unknown]; Pfam:PF09512:ThiW; PIRSF:PIRSF024534:ThiW.
       0.531
thiE-2
thiE: thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
    0.521
hisZ
ATP phosphoribosyltransferase, regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
  
     0.498
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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