STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47751.1COG:COG3246: Uncharacterized conserved protein [Function unknown]; Pfam:PF05853:3-keto-5-aminohexanoate cleavage enzyme. (315 aa)    
Predicted Functional Partners:
AHY46997.1
TIGRFAM:TIGR02429:3-oxoacid CoA-transferase, subunit A; COG:COG1788: Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit [Lipid metabolism]; Pfam:PF01144:Coenzyme A transferase family I; SMART:SM00882:Coenzyme A transferase family I; SUPERFAMILY:SSF100950:No Description; pcaI_scoA_fam.
 
  
 0.931
AHY45629.1
COG:COG1878: Predicted metal-dependent hydrolase [General function prediction only]; Pfam:PF04199:Putative cyclase; Pfam:PF04199:Putative cyclase; SUPERFAMILY:SSF102198:No Description.
  
    0.712
AHY48028.1
Cupin domain; COG:COG1917: Uncharacterized conserved protein contains double-stranded beta-helix domain [Function unknown]; Pfam:PF07883:Cupin 2, conserved barrel; SUPERFAMILY:SSF51182:RmlC-like cupin domain.
  
    0.589
AHY47750.1
TIGRFAM:TIGR01893:Peptidase M20C, Xaa-His dipeptidase; COG:COG2195: Di- and tripeptidases [Amino acid transport and metabolism]; Pfam:PF01546:Peptidase M20; PIRSF:PIRSF016599:Peptidase M20C, Xaa-His dipeptidase; PRINTS:PR00934:Peptidase M20C, Xaa-His dipeptidase; SUPERFAMILY:SSF53187:No Description.
       0.542
AHY47839.1
COG:COG1250: 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; PIRSF:PIRSF000105:3-hydroxyacyl-CoA dehydrogenase; SUPERFAMILY:SSF51735:No Description.
  
  
 0.437
AHY47752.1
COG:COG0580: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]; Pfam:PF00230:Major intrinsic protein; Pfam:PF00230:Major intrinsic protein; PRINTS:PR00783:Major intrinsic protein; ProSitePatterns:PS00221:Major intrinsic protein, conserved site; SUPERFAMILY:SSF81338:Aquaporin-like; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.432
AHY47122.1
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COG:COG1250: 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; SUPERFAMILY:SSF51735:No Description;MetaCyc: PWY-1361; MetaCyc: PWY-5109; MetaCyc: PWY-5136; MetaCyc: PWY-5138; MetaCyc: PWY-5789; MetaCyc: PWY-6435; MetaCyc: PWY-735; UniPathway: UPA00659.
  
  
 0.405
AHY47172.1
COG:COG2814: Arabinose efflux permease [Carbohydrate transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; Pfam:PF07690:Major facilitator superfamily; PRINTS:PR01035:Tetracycline resistance protein, TetA/multidrug resistance protein MdtG; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter.
   
    0.404
AHY47724.1
Drug resistance MFS transporter, drugH+ antiporter-2 (14 Spanner) (DHA2) family; TIGRFAM:TIGR00711:Drug resistance transporter EmrB/QacA subfamily; COG:COG2814: Arabinose efflux permease [Carbohydrate transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; PRINTS:PR01036:Tetracycline resistance protein TetB/drug resistance transporter; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter; efflux_EmrB.
   
    0.404
AHY47796.1
Major Facilitator Superfamily; COG:COG2814: Arabinose efflux permease [Carbohydrate transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; PRINTS:PR01035:Tetracycline resistance protein, TetA/multidrug resistance protein MdtG; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter.
   
    0.404
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (16%) [HD]
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