STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47756.1COG:COG2390: Transcriptional regulator contains sigma factor-related N-terminal domain [Transcription]; Pfam:PF04198:Sugar-binding domain, putative; Pfam:PF04198:Sugar-binding domain, putative; SUPERFAMILY:SSF100950:No Description. (331 aa)    
Predicted Functional Partners:
AHY46307.1
TIGRFAM:TIGR02363:Dihydroxyacetone kinase DhaK, subunit 1; COG:COG2376: Dihydroxyacetone kinase [Carbohydrate transport and metabolism]; Pfam:PF02733:Dak kinase; ProSiteProfiles:PS51481:Dak kinase; SUPERFAMILY:SSF82549:No Description;KEGG: 00540; KEGG: 00563; UniPathway: UPA00616.
     0.920
AHY47754.1
COG:COG1070: Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]; Pfam:PF00370:Carbohydrate kinase, FGGY, N-terminal; Pfam:PF00370:Carbohydrate kinase, FGGY, N-terminal; SUPERFAMILY:SSF53067:No Description.
 
  
 0.650
AHY47755.1
Iron-containing alcohol dehydrogenase; COG:COG0371: Glycerol dehydrogenase and related enzymes [Energy production and conversion]; Pfam:PF13685:Iron-containing alcohol dehydrogenase; SUPERFAMILY:SSF56796:No Description.
 
     0.644
AHY46924.1
COG:COG4578: Glucitol operon activator [Transcription]; Pfam:PF06923:Glucitol operon activator.
 
     0.575
AHY47761.1
COG:COG1070: Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]; Pfam:PF00370:Carbohydrate kinase, FGGY, N-terminal; Pfam:PF00370:Carbohydrate kinase, FGGY, N-terminal; ProSitePatterns:PS00445:Carbohydrate kinase, FGGY, conserved site; SUPERFAMILY:SSF53067:No Description; Belongs to the FGGY kinase family.
 
  
 0.521
pgk
COG:COG0126: 3-phosphoglycerate kinase [Carbohydrate transport and metabolism]; Pfam:PF00162:Phosphoglycerate kinase; Hamap:MF_00145:Phosphoglycerate kinase; Pfam:PF00162:Phosphoglycerate kinase; PIRSF:PIRSF000724:Phosphoglycerate kinase; PRINTS:PR00477:Phosphoglycerate kinase; ProSitePatterns:PS00111:Phosphoglycerate kinase, conserved site; SUPERFAMILY:SSF53748:Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
  
 0.516
AHY46927.1
COG:COG3731: Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism]; Pfam:PF03829:Phosphotransferase system, glucitol/sorbitol-specific IIA component; Pfam:PF03829:Phosphotransferase system, glucitol/sorbitol-specific IIA component; ProSiteProfiles:PS51097:Phosphotransferase system, glucitol/sorbitol-specific IIA component; SUPERFAMILY:SSF141530:No Description.
 
     0.505
AHY46925.1
EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component; TIGRFAM:TIGR00821:Phosphotransferase system, enzyme II sorbitol-specific factor; COG:COG3730: Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism]; Pfam:PF03608:Phosphotransferase system, enzyme II sorbitol-specific factor; PIRSF:PIRSF038321:Phosphotransferase system, enzyme II sorbitol-specific factor; ProSiteProfiles:PS51107:Phosphotransferase system, enzyme II sorbitol-specific factor.
 
     0.503
AHY46926.1
COG:COG3732: Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism]; Pfam:PF03612:Sorbitol phosphotransferase enzyme II, N-terminal; Pfam:PF03612:Sorbitol phosphotransferase enzyme II, N-terminal; ProSiteProfiles:PS51102:Sorbitol phosphotransferase enzyme II, N-terminal.
 
     0.491
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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