STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47764.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (33 aa)    
Predicted Functional Partners:
AHY47765.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.570
AHY47766.1
Gamma-glutamyltransferase; TIGRFAM:TIGR00066:Gamma-glutamyltranspeptidase; COG:COG0405: Gamma-glutamyltransferase [Amino acid transport and metabolism]; Pfam:PF01019:Gamma-glutamyltranspeptidase; PRINTS:PR01210:Gamma-glutamyltranspeptidase; SUPERFAMILY:SSF56235:No Description;KEGG: 00430; KEGG: 00450; KEGG: 00460; KEGG: 00480; KEGG: 00590; MetaCyc: PWY-4041; MetaCyc: PWY-5826; g_glut_trans.
       0.405
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.