STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47770.1COG:COG1914: Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]; Pfam:PF01566:Natural resistance-associated macrophage like; Pfam:PF01566:Natural resistance-associated macrophage like; PRINTS:PR00447:Natural resistance-associated macrophage like. (431 aa)    
Predicted Functional Partners:
AHY47768.1
COG:COG0146: N-methylhydantoinase B/acetone carboxylase alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF02538:Hydantoinase B/oxoprolinase; Pfam:PF02538:Hydantoinase B/oxoprolinase.
       0.781
AHY47769.1
COG:COG0145: N-methylhydantoinase A/acetone carboxylase beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01968:Hydantoinase/oxoprolinase; Pfam:PF01968:Hydantoinase/oxoprolinase; SUPERFAMILY:SSF53067:No Description.
       0.781
AHY47509.1
Iron dependent repressor, metal binding and dimerization domain; COG:COG1321: Mn-dependent transcriptional regulator [Transcription]; Pfam:PF02742:Iron dependent repressor-like, metal binding and dimerisation domain; ProSiteProfiles:PS50944:Iron dependent repressor, N-terminal; SMART:SM00529:Iron dependent repressor, diptheria toxin type; SUPERFAMILY:SSF47979:Iron dependent repressor-like, metal binding and dimerisation domain.
  
  
 0.510
AHY46204.1
Uncharacterized proteins homologs of lactam utilization protein B; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.486
AHY47771.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COG:COG4585: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF02518:Histidine kinase-like ATPase, ATP-binding domain; ProSiteProfiles:PS50109:Signal transduction histidine kinase, core; SUPERFAMILY:SSF55874:Histidine kinase-like ATPase, ATP-binding domain.
     
 0.485
AHY46203.1
Biotin-dependent carboxylase uncharacterized domain; TIGRFAM:TIGR00724:Allophanate hydrolase subunit 2; COG:COG1984: Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]; Pfam:PF02626:Allophanate hydrolase subunit 2; SMART:SM00797:Allophanate hydrolase subunit 2; SUPERFAMILY:SSF50891:Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain; urea_amlyse_rel.
 
  
 0.474
AHY46980.1
Heavy metal translocating P-type ATPase; TIGRFAM:TIGR01525:Cation-transporting P-type ATPase, subfamily IB; COG:COG2217: Cation transport ATPase [Inorganic ion transport and metabolism]; Pfam:PF00122:P-type ATPase, A domain; PRINTS:PR00119:Cation-transporting P-type ATPase; ProSitePatterns:PS01047:Heavy-metal-associated, conserved site; ProSiteProfiles:PS50846:Heavy metal-associated domain, HMA; SUPERFAMILY:SSF56784:HAD-like domain; ATPase-IB_hvy.
  
 
 0.458
AHY46419.1
COG:COG1108: ABC-type Mn2+/Zn2+ transport systems permease components [Inorganic ion transport and metabolism]; Pfam:PF00950:ABC-3; Pfam:PF00950:ABC-3; SUPERFAMILY:SSF81345:No Description.
  
  
 0.402
AHY46420.1
COG:COG1108: ABC-type Mn2+/Zn2+ transport systems permease components [Inorganic ion transport and metabolism]; Pfam:PF00950:ABC-3; Pfam:PF00950:ABC-3; SUPERFAMILY:SSF81345:No Description.
  
  
 0.402
AHY46421.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
  
 0.402
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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