STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47796.1Major Facilitator Superfamily; COG:COG2814: Arabinose efflux permease [Carbohydrate transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; PRINTS:PR01035:Tetracycline resistance protein, TetA/multidrug resistance protein MdtG; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter. (412 aa)    
Predicted Functional Partners:
AHY47795.1
Pfam:PF01844:HNH endonuclease.
       0.655
AHY47408.1
COG:COG2814: Arabinose efflux permease [Carbohydrate transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; Pfam:PF07690:Major facilitator superfamily; PRINTS:PR01035:Tetracycline resistance protein, TetA/multidrug resistance protein MdtG; ProSitePatterns:PS00216:Sugar transporter, conserved site; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter.
  
     0.466
AHY47797.1
Sulfite exporter TauE/SafE; COG:COG0730: Predicted permeases [General function prediction only]; Pfam:PF01925:Transmembrane protein TauE like.
       0.458
AHY45629.1
COG:COG1878: Predicted metal-dependent hydrolase [General function prediction only]; Pfam:PF04199:Putative cyclase; Pfam:PF04199:Putative cyclase; SUPERFAMILY:SSF102198:No Description.
   
    0.443
AHY45530.1
TIGRFAM:TIGR03717:Integral membrane protein YjbE; COG:COG0861: Membrane protein TerC possibly involved in tellurium resistance [Inorganic ion transport and metabolism]; Pfam:PF03741:Integral membrane protein TerC; R_switched_YjbE.
  
     0.407
AHY47751.1
COG:COG3246: Uncharacterized conserved protein [Function unknown]; Pfam:PF05853:3-keto-5-aminohexanoate cleavage enzyme.
   
    0.404
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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