STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47851.1COG:COG3301: Formate-dependent nitrite reductase membrane component [Inorganic ion transport and metabolism]; Pfam:PF03916:NrfD family; Pfam:PF03916:NrfD family. (356 aa)    
Predicted Functional Partners:
AHY47852.1
4Fe-4S dicluster domain; COG:COG0437: Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion]; Pfam:PF13247:4Fe-4S ferredoxin-type, iron-sulpur binding domain; PIRSF:PIRSF036298:Formate dehydrogenase, iron-sulphur subunit; ProSitePatterns:PS00198:4Fe-4S ferredoxin, iron-sulphur binding, conserved site; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description.
 
  
 0.962
AHY47854.1
Molybdopterin oxidoreductase; COG:COG3383: Uncharacterized anaerobic dehydrogenase [General function prediction only]; Pfam:PF00384:Molybdopterin oxidoreductase; SUPERFAMILY:SSF53706:No Description; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.961
AHY47855.1
Molybdopterin oxidoreductase Fe4S4 domain; COG:COG3383: Uncharacterized anaerobic dehydrogenase [General function prediction only]; Pfam:PF04879:Molybdopterin oxidoreductase, 4Fe-4S domain; SMART:SM00926:Molybdopterin oxidoreductase, 4Fe-4S domain; SUPERFAMILY:SSF53706:No Description.
 
     0.953
adk-2
Adk: adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
       0.773
AHY47853.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.773
AHY47973.1
PRC-barrel domain; COG:COG5271: AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]; Pfam:PF05239:PRC-barrel domain; SUPERFAMILY:SSF50346:PRC-barrel-like.
 
     0.422
selA
selA: L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
   
 0.405
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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