STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47870.1Peroxiredoxin, OsmC subfamily; TIGRFAM:TIGR03562:Peroxiredoxin, osmotically inducible protein C, subgroup; COG:COG1764: Predicted redox protein regulator of disulfide bond formation [Posttranslational modification protein turnover chaperones]; Pfam:PF02566:Peroxiredoxin, OsmC-like protein; SUPERFAMILY:SSF82784:Peroxiredoxin, OsmC-like protein;KEGG: 00480; osmo_induc_OsmC. (147 aa)    
Predicted Functional Partners:
AHY47871.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COG:COG0642: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF02518:Histidine kinase-like ATPase, ATP-binding domain; PRINTS:PR00344:Signal transduction histidine kinase-related protein, C-terminal; ProSiteProfiles:PS50885:HAMP linker domain; SMART:SM00387:Histidine kinase-like ATPase, ATP-binding domain; SUPERFAMILY:SSF55874:Histidine kinase-like ATPase, ATP-binding domain.
       0.497
AHY47872.1
COG:COG0471: Di- and tricarboxylate transporters [Inorganic ion transport and metabolism]; Pfam:PF00939:Sodium/sulphate symporter; Pfam:PF00939:Sodium/sulphate symporter.
       0.493
AHY45547.1
COG:COG0380: Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]; Pfam:PF00982:Glycosyl transferase, family 20; Pfam:PF00982:Glycosyl transferase, family 20; SUPERFAMILY:SSF53756:No Description.
  
    0.481
AHY47873.1
TIGRFAM:TIGR00045:Glycerate kinase; COG:COG1929: Glycerate kinase [Carbohydrate transport and metabolism]; Pfam:PF02595:Glycerate kinase; PIRSF:PIRSF006078:Glycerate kinase; SUPERFAMILY:SSF110738:Glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.465
AHY45611.1
TIGRFAM:TIGR00229:PAS domain; COG:COG2208: Serine phosphatase RsbU regulator of sigma subunit [Signal transduction mechanisms / Transcription]; Pfam:PF07228:Protein phosphatase 2C (PP2C)-like; ProSiteProfiles:PS50112:PAS domain; SMART:SM00331:Protein phosphatase 2C (PP2C)-like; SUPERFAMILY:SSF55785:PAS domain; sensory_box.
  
  
 0.460
AHY46230.1
TIGRFAM:TIGR00229:PAS domain; COG:COG4585: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF08447:PAS fold-3; ProSiteProfiles:PS50112:PAS domain; SMART:SM00065:GAF domain; SUPERFAMILY:SSF55785:PAS domain; sensory_box.
  
  
 0.453
AHY47471.1
COG:COG0656: Aldo/keto reductases related to diketogulonate reductase [General function prediction only]; Pfam:PF00248:NADP-dependent oxidoreductase domain; Pfam:PF00248:NADP-dependent oxidoreductase domain; PRINTS:PR00069:Aldo/keto reductase subgroup; ProSitePatterns:PS00798:Aldo/keto reductase, conserved site; SUPERFAMILY:SSF51430:NADP-dependent oxidoreductase domain.
  
  
 0.445
AHY46024.1
TIGRFAM:TIGR03558:Luciferase family oxidoreductase, group 1; COG:COG2141: Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion]; Pfam:PF00296:Luciferase-like domain; SUPERFAMILY:SSF51679:Luciferase-like domain; oxido_grp_1.
 
     0.439
AHY46468.1
COG:COG0693: Putative intracellular protease/amidase [General function prediction only]; Pfam:PF01965:ThiJ/PfpI; Pfam:PF01965:ThiJ/PfpI; ProSiteProfiles:PS51276:Peptidase C56, PfpI; SUPERFAMILY:SSF52317:No Description.
  
  
 0.405
AHY46478.1
TIGRFAM:TIGR00229:PAS domain; COG:COG4585: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF08448:PAS fold-4; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00065:GAF domain; SUPERFAMILY:SSF55785:PAS domain; sensory_box.
   
  
 0.400
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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