STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47872.1COG:COG0471: Di- and tricarboxylate transporters [Inorganic ion transport and metabolism]; Pfam:PF00939:Sodium/sulphate symporter; Pfam:PF00939:Sodium/sulphate symporter. (505 aa)    
Predicted Functional Partners:
AHY47871.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COG:COG0642: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF02518:Histidine kinase-like ATPase, ATP-binding domain; PRINTS:PR00344:Signal transduction histidine kinase-related protein, C-terminal; ProSiteProfiles:PS50885:HAMP linker domain; SMART:SM00387:Histidine kinase-like ATPase, ATP-binding domain; SUPERFAMILY:SSF55874:Histidine kinase-like ATPase, ATP-binding domain.
 
     0.862
AHY47873.1
TIGRFAM:TIGR00045:Glycerate kinase; COG:COG1929: Glycerate kinase [Carbohydrate transport and metabolism]; Pfam:PF02595:Glycerate kinase; PIRSF:PIRSF006078:Glycerate kinase; SUPERFAMILY:SSF110738:Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
     0.846
AHY47870.1
Peroxiredoxin, OsmC subfamily; TIGRFAM:TIGR03562:Peroxiredoxin, osmotically inducible protein C, subgroup; COG:COG1764: Predicted redox protein regulator of disulfide bond formation [Posttranslational modification protein turnover chaperones]; Pfam:PF02566:Peroxiredoxin, OsmC-like protein; SUPERFAMILY:SSF82784:Peroxiredoxin, OsmC-like protein;KEGG: 00480; osmo_induc_OsmC.
       0.493
AHY47874.1
COG:COG1335: Amidases related to nicotinamidase [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00857:Isochorismatase-like; Pfam:PF00857:Isochorismatase-like; SUPERFAMILY:SSF52499:Isochorismatase-like.
  
    0.442
AHY45402.1
Glutamate-cysteine ligase family 2(GCS2); COG:COG2170: Uncharacterized conserved protein [Function unknown]; Pfam:PF04107:Glutamate--cysteine ligase, GCS2; SUPERFAMILY:SSF55931:No Description.
  
     0.438
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.