STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47875.1Pfam:PF00520:Ion transport domain; SUPERFAMILY:SSF81324:No Description. (271 aa)    
Predicted Functional Partners:
AHY46531.1
COG:COG0168: Trk-type K+ transport systems membrane components [Inorganic ion transport and metabolism]; Pfam:PF02386:Cation transporter; Pfam:PF02386:Cation transporter; PIRSF:PIRSF006247:Potassium uptake protein TrkH family.
  
 
 0.644
AHY47876.1
COG:COG1238: Predicted membrane protein [Function unknown]; Pfam:PF09335:SNARE associated Golgi protein; Pfam:PF09335:SNARE associated Golgi protein.
       0.547
AHY47874.1
COG:COG1335: Amidases related to nicotinamidase [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00857:Isochorismatase-like; Pfam:PF00857:Isochorismatase-like; SUPERFAMILY:SSF52499:Isochorismatase-like.
       0.532
AHY45672.1
COG:COG0314: Molybdopterin converting factor large subunit [Coenzyme metabolism]; Pfam:PF02391:Molybdopterin biosynthesis MoaE; Pfam:PF02391:Molybdopterin biosynthesis MoaE; SUPERFAMILY:SSF54690:Molybdopterin biosynthesis MoaE.
   
    0.468
AHY47038.1
TIGRFAM:TIGR01469:Uroporphyrin-III C-methyltransferase; COG:COG0007: Uroporphyrinogen-III methylase [Coenzyme metabolism]; Pfam:PF02602:Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; ProSitePatterns:PS00840:Uroporphiryn-III C-methyltransferase, conserved site; SUPERFAMILY:SSF53790:Tetrapyrrole methylase;KEGG: 00860; MetaCyc: PWY-5194; MetaCyc: PWY-5196; UniPathway: UPA00148; UniPathway: UPA00148; UniPathway: UPA00262; UniPathway: UPA00262; UniPathway: UPA00262; cobA_cysG_Cterm.
  
    0.455
selA
selA: L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
   
    0.412
AHY45818.1
Pfam:PF07885:Ion transport 2; SUPERFAMILY:SSF81324:No Description.
  
     0.400
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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