STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47909.1COG:COG2080: Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs [Energy production and conversion]; Pfam:PF01799:[2Fe-2S]-binding; Pfam:PF01799:[2Fe-2S]-binding; ProSiteProfiles:PS51085:2Fe-2S ferredoxin-type domain; SUPERFAMILY:SSF47741:[2Fe-2S]-binding. (159 aa)    
Predicted Functional Partners:
AHY47907.1
COG:COG1319: Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs [Energy production and conversion]; Pfam:PF00941:Molybdopterin dehydrogenase, FAD-binding; Pfam:PF00941:Molybdopterin dehydrogenase, FAD-binding; ProSiteProfiles:PS51387:FAD-binding, type 2; SMART:SM01092:CO dehydrogenase flavoprotein, C-terminal; SUPERFAMILY:SSF56176:FAD-binding, type 2.
 
 0.997
AHY47908.1
COG:COG1529: Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs [Energy production and conversion]; Pfam:PF02738:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Pfam:PF02738:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SMART:SM01008:Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; SUPERFAMILY:SSF56003:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding.
 
 0.997
AHY46206.1
COG:COG1529: Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs [Energy production and conversion]; Pfam:PF02738:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Pfam:PF02738:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SMART:SM01008:Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; SUPERFAMILY:SSF56003:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding.
 
 0.990
AHY46584.1
TIGRFAM:TIGR03196:Xanthine dehydrogenase D subunit; COG:COG1529: Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs [Energy production and conversion]; Pfam:PF02738:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SMART:SM01008:Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; SUPERFAMILY:SSF56003:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding;KEGG: 00230; MetaCyc: PWY-6237; MetaCyc: PWY-6596; UniPathway: UPA00604; UniPathway: UPA00604.
 
 0.990
AHY46581.1
COG:COG1319: Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs [Energy production and conversion]; Pfam:PF00941:Molybdopterin dehydrogenase, FAD-binding; Pfam:PF00941:Molybdopterin dehydrogenase, FAD-binding; ProSiteProfiles:PS51387:FAD-binding, type 2; SMART:SM01092:CO dehydrogenase flavoprotein, C-terminal; SUPERFAMILY:SSF56176:FAD-binding, type 2.
 
 0.986
AHY46972.1
COG:COG1529: Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs [Energy production and conversion]; Pfam:PF02738:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Pfam:PF02738:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SMART:SM01008:Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; SUPERFAMILY:SSF56003:Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding.
 
 0.977
AHY47901.1
Hypothetical protein; COG:COG3427: Uncharacterized conserved protein [Function unknown]; Pfam:PF06240:Carbon monoxide dehydrogenase subunit G; Pfam:PF06240:Carbon monoxide dehydrogenase subunit G; SUPERFAMILY:SSF55961:No Description.
     0.924
AHY47903.1
COG:COG1975: Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family [Posttranslational modification protein turnover chaperones]; Pfam:PF13478:XdhC Rossmann domain; Pfam:PF13478:XdhC Rossmann domain.
 
  
 0.920
AHY47902.1
COG:COG2068: Uncharacterized MobA-related protein [General function prediction only]; Pfam:PF12804:MobA-like NTP transferase domain; Pfam:PF12804:MobA-like NTP transferase domain; SUPERFAMILY:SSF53448:No Description.
 
  
 0.876
AHY47904.1
XdhC and CoxI family; COG:COG1975: Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family [Posttranslational modification protein turnover chaperones]; Pfam:PF02625:XdhC- CoxI.
 
  
 0.827
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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