STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47925.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60; ProSiteProfiles:PS51257:Prokaryotic membrane lipoprotein lipid attachment site profile. (284 aa)    
Predicted Functional Partners:
AHY47926.1
Pfam:PF13620:Carboxypeptidase regulatory-like domain; SUPERFAMILY:SSF49478:Collagen-binding surface protein Cna, B-type domain.
     
 0.817
AHY47927.1
COG:COG0310: ABC-type Co2+ transport system permease component [Inorganic ion transport and metabolism]; Pfam:PF01891:Cobalamin (vitamin B12) biosynthesis CbiM family; Pfam:PF01891:Cobalamin (vitamin B12) biosynthesis CbiM family.
       0.791
AHY47928.1
TIGRFAM:TIGR02454:ABC transporter CbiQ family; COG:COG0619: ABC-type cobalt transport system permease component CbiQ and related transporters [Inorganic ion transport and metabolism]; Pfam:PF02361:ABC/ECF transporter, transmembrane component; CbiQ_TIGR.
     
 0.791
AHY47929.1
COG:COG1122: ABC-type cobalt transport system ATPase component [Inorganic ion transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
     
 0.782
AHY47930.1
Hypothetical protein; COG:COG1720: Uncharacterized conserved protein [Function unknown]; Pfam:PF01980:Uncharacterised domain UPF0066; Pfam:PF01980:Uncharacterised domain UPF0066; SUPERFAMILY:SSF118196:Uncharacterised domain UPF0066, YaeB-like domain.
       0.773
AHY47924.1
COG:COG0735: Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]; Pfam:PF01475:Ferric-uptake regulator; Pfam:PF01475:Ferric-uptake regulator; SUPERFAMILY:SSF46785:No Description; Belongs to the Fur family.
       0.588
AHY47931.1
Pfam:PF14026:Protein of unknown function DUF4242.
       0.510
AHY47923.1
COG:COG1051: ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]; Pfam:PF00293:NUDIX hydrolase domain; Pfam:PF00293:NUDIX hydrolase domain; ProSitePatterns:PS00893:NUDIX hydrolase, conserved site; ProSiteProfiles:PS51462:NUDIX hydrolase domain; SUPERFAMILY:SSF55811:NUDIX hydrolase domain-like.
       0.462
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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