STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47929.1COG:COG1122: ABC-type cobalt transport system ATPase component [Inorganic ion transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase. (260 aa)    
Predicted Functional Partners:
AHY47928.1
TIGRFAM:TIGR02454:ABC transporter CbiQ family; COG:COG0619: ABC-type cobalt transport system permease component CbiQ and related transporters [Inorganic ion transport and metabolism]; Pfam:PF02361:ABC/ECF transporter, transmembrane component; CbiQ_TIGR.
 
 0.997
AHY47927.1
COG:COG0310: ABC-type Co2+ transport system permease component [Inorganic ion transport and metabolism]; Pfam:PF01891:Cobalamin (vitamin B12) biosynthesis CbiM family; Pfam:PF01891:Cobalamin (vitamin B12) biosynthesis CbiM family.
 
 0.995
AHY47194.1
COG:COG0619: ABC-type cobalt transport system permease component CbiQ and related transporters [Inorganic ion transport and metabolism]; Pfam:PF02361:ABC/ECF transporter, transmembrane component; Pfam:PF02361:ABC/ECF transporter, transmembrane component.
 
 0.986
AHY47926.1
Pfam:PF13620:Carboxypeptidase regulatory-like domain; SUPERFAMILY:SSF49478:Collagen-binding surface protein Cna, B-type domain.
 
   
 0.946
AHY46053.1
TIGRFAM:TIGR01727:Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; COG:COG0444: ABC-type dipeptide/oligopeptide/nickel transport system ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]; Pfam:PF08352:Oligopeptide/dipeptide ABC transporter, C-terminal; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase; oligo_HPY; Belongs to the ABC transporter superfamily.
 
     
0.900
AHY46179.1
TIGRFAM:TIGR01186:Glycine betaine transport ATP-binding subunit; COG:COG1125: ABC-type proline/glycine betaine transport systems ATPase components [Amino acid transport and metabolism]; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
    
0.799
AHY47925.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60; ProSiteProfiles:PS51257:Prokaryotic membrane lipoprotein lipid attachment site profile.
     
 0.782
AHY47930.1
Hypothetical protein; COG:COG1720: Uncharacterized conserved protein [Function unknown]; Pfam:PF01980:Uncharacterised domain UPF0066; Pfam:PF01980:Uncharacterised domain UPF0066; SUPERFAMILY:SSF118196:Uncharacterised domain UPF0066, YaeB-like domain.
       0.773
AHY46302.1
COG:COG3638: ABC-type phosphate/phosphonate transport system ATPase component [Inorganic ion transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
    
0.758
AHY46961.1
COG:COG0410: ABC-type branched-chain amino acid transport systems ATPase component [Amino acid transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
     
0.667
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (28%) [HD]
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