STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47936.1Pfam:PF12483:E3 Ubiquitin ligase;UniPathway: UPA00143. (248 aa)    
Predicted Functional Partners:
AHY47937.1
Pfam:PF12158:Protein of unknown function DUF3592.
       0.655
AHY47935.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.642
AHY47027.1
TIGRFAM:TIGR00374:Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD; COG:COG0392: Predicted integral membrane protein [Function unknown]; Pfam:PF03706:Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD.
  
     0.551
AHY47047.1
TIGRFAM:TIGR03883:Conserved hypothetical protein CHP03883, F420 biosynthesis associated; COG:COG5282: Uncharacterized conserved protein [Function unknown]; Pfam:PF10103:Protein of unknown function DUF2342; SUPERFAMILY:SSF55486:No Description.
  
     0.467
AHY47938.1
TIGRFAM:TIGR00656:Aspartate kinase, monofunctional class; COG:COG0527: Aspartokinases [Amino acid transport and metabolism]; Pfam:PF00696:Aspartate/glutamate/uridylate kinase; PIRSF:PIRSF000726:Aspartate kinase, monofunctional class; ProSitePatterns:PS00324:Aspartate kinase, conserved site; SUPERFAMILY:SSF53633:Aspartate/glutamate/uridylate kinase;KEGG: 00260; KEGG: 00270; KEGG: 00300; MetaCyc: PWY-2941; UniPathway: UPA00034; UniPathway: UPA00050; UniPathway: UPA00051; asp_kin_monofn; Belongs to the aspartokinase family.
       0.445
dapA
dapA: dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.445
dapB
dapB: dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
       0.445
AHY45861.1
ATP-NAD kinase; COG:COG3199: Uncharacterized conserved protein [Function unknown]; Pfam:PF01513:Inorganic polyphosphate/ATP-NAD kinase, predicted; PIRSF:PIRSF018567:Acetoin catabolism kinase AcoX; SUPERFAMILY:SSF111331:ATP-NAD kinase-like domain;MetaCyc: PWY-5083.
  
     0.420
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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