STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47950.1MarR family; COG:COG1510: Predicted transcriptional regulators [Transcription]; Pfam:PF12802:MarR family; SUPERFAMILY:SSF46785:No Description. (153 aa)    
Predicted Functional Partners:
AHY47948.1
ABC-2 family transporter protein; COG:COG3559: Putative exporter of polyketide antibiotics [Cell envelope biogenesis outer membrane]; Pfam:PF12679:ABC-2 family transporter protein.
       0.797
AHY47949.1
COG:COG1131: ABC-type multidrug transport system ATPase component [Defense mechanisms]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
       0.773
AHY47947.1
Protein of unknown function (DUF815); COG:COG2607: Predicted ATPase (AAA+ superfamily) [General function prediction only]; Pfam:PF05673:Domain of unknown function DUF815; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
       0.615
AHY47951.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.474
AHY47460.1
TIGRFAM:TIGR03440:Ergothioneine biosynthesis protein EgtB; COG:COG1262: Uncharacterized conserved protein [Function unknown]; Pfam:PF03781:Formylglycine-generating sulphatase enzyme domain; SUPERFAMILY:SSF56436:C-type lectin fold; egtB_TIGR03440.
  
     0.446
AHY47489.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
   
 0.403
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.