STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47963.1ABC-2 family transporter protein; COG:COG0842: ABC-type multidrug transport system permease component [Defense mechanisms]; Pfam:PF12698:ABC-2 family transporter protein; ProSiteProfiles:PS51012:ABC-2. (497 aa)    
Predicted Functional Partners:
AHY47962.1
COG:COG1131: ABC-type multidrug transport system ATPase component [Defense mechanisms]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
 0.949
AHY47964.1
Biotin/lipoate A/B protein ligase family; COG:COG0095: Lipoate-protein ligase A [Coenzyme metabolism]; Pfam:PF03099:Biotin/lipoate A/B protein ligase; SUPERFAMILY:SSF55681:No Description;UniPathway: UPA00538.
       0.727
AHY47965.1
COG:COG0598: Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]; Pfam:PF01544:Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB; Pfam:PF01544:Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB; SUPERFAMILY:SSF143865:No Description.
       0.580
AHY47966.1
Pfam:PF13396:Cardiolipin synthase N-terminal.
  
    0.512
AHY47396.1
ABC-2 type transporter; COG:COG0842: ABC-type multidrug transport system permease component [Defense mechanisms]; Pfam:PF01061:ABC-2 type transporter; PIRSF:PIRSF006648:No Description; ProSiteProfiles:PS51012:ABC-2.
  
  
  0.456
AHY46047.1
TIGRFAM:TIGR01188:Daunorubicin resistance ABC transporter ATP-binding subunit DrrA; COG:COG1131: ABC-type multidrug transport system ATPase component [Defense mechanisms]; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
 0.453
AHY47663.1
COG:COG1131: ABC-type multidrug transport system ATPase component [Defense mechanisms]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
 0.446
AHY46046.1
COG:COG0842: ABC-type multidrug transport system permease component [Defense mechanisms]; Pfam:PF01061:ABC-2 type transporter; Pfam:PF01061:ABC-2 type transporter; PIRSF:PIRSF006648:No Description; ProSiteProfiles:PS51012:ABC-2.
  
  
  0.444
AHY47397.1
TIGRFAM:TIGR01188:Daunorubicin resistance ABC transporter ATP-binding subunit DrrA; COG:COG1131: ABC-type multidrug transport system ATPase component [Defense mechanisms]; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
 0.444
AHY47682.1
Hypothetical protein; COG:COG1944: Uncharacterized conserved protein [Function unknown]; Pfam:PF02624:YcaO-like; Pfam:PF02624:YcaO-like.
  
  
 0.424
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (26%) [HD]
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