STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47976.1Acetyltransferase (GNAT) family; Pfam:PF00583:GNAT domain; SUPERFAMILY:SSF55729:Acyl-CoA N-acyltransferase. (250 aa)    
Predicted Functional Partners:
AHY47975.1
ATPase family associated with various cellular activities (AAA); COG:COG1222: ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification protein turnover chaperones]; Pfam:PF00004:ATPase, AAA-type, core; ProSitePatterns:PS00674:ATPase, AAA-type, conserved site; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
       0.645
AHY47977.1
ATPcob(I)alamin adenosyltransferase; TIGRFAM:TIGR00636:Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like; COG:COG2096: Uncharacterized conserved protein [Function unknown]; Pfam:PF01923:Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like; SUPERFAMILY:SSF89028:Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like;KEGG: 00860; MetaCyc: PWY-5508; MetaCyc: PWY-6268; MetaCyc: PWY-6269; PduO_Nterm.
       0.537
AHY47978.1
Putative F420-dependent oxidoreductase, Rv1855c family; TIGRFAM:TIGR03560:F420-dependent oxidoreductase-predicted, Rv1855c; COG:COG2141: Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion]; Pfam:PF00296:Luciferase-like domain; SUPERFAMILY:SSF51679:Luciferase-like domain.
       0.442
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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