STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47988.1Glycosyl transferases group 1; COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description. (404 aa)    
Predicted Functional Partners:
AHY47989.1
COG:COG4671: Predicted glycosyl transferase [General function prediction only]; Pfam:PF04101:Glycosyl transferase, family 28, C-terminal; Pfam:PF04101:Glycosyl transferase, family 28, C-terminal; SUPERFAMILY:SSF53756:No Description.
     0.979
AHY47987.1
COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description.
    
0.972
AHY47985.1
Phosphotransferase enzyme family; COG:COG3173: Predicted aminoglycoside phosphotransferase [General function prediction only]; Pfam:PF01636:Aminoglycoside phosphotransferase; SUPERFAMILY:SSF56112:Protein kinase-like domain.
 
  
 0.946
AHY47984.1
Phosphotransferase enzyme family; COG:COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]; Pfam:PF01636:Aminoglycoside phosphotransferase; SUPERFAMILY:SSF56112:Protein kinase-like domain.
 
     0.944
AHY47986.1
COG:COG1132: ABC-type multidrug transport system ATPase and permease components [Defense mechanisms]; Pfam:PF00664:ABC transporter, transmembrane domain; Pfam:PF00664:ABC transporter, transmembrane domain; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
   0.901
AHY45742.1
TIGRFAM:TIGR03025:Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COG:COG2148: Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis outer membrane]; Pfam:PF02397:Bacterial sugar transferase; EPS_sugtrans.
 
  
 0.564
AHY47001.1
TIGRFAM:TIGR03022:Undecaprenyl-phosphate galactose phosphotransferase, WbaP; COG:COG2148: Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis outer membrane]; Pfam:PF02397:Bacterial sugar transferase; WbaP_sugtrans.
 
  
 0.555
AHY45743.1
TIGRFAM:TIGR03026:Nucleotide sugar dehydrogenase; COG:COG1004: Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis outer membrane]; Pfam:PF03721:UDP-glucose/GDP-mannose dehydrogenase, N-terminal; PIRSF:PIRSF000124:Nucleotide sugar dehydrogenase; SMART:SM00984:UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SUPERFAMILY:SSF51735:No Description.
 
  
 0.527
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.526
AHY45513.1
rmlA: glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.525
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.