STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47991.1Yip1 domain; COG:COG2881: Uncharacterized protein conserved in archaea [Function unknown]; Pfam:PF04893:Yip1 domain. (190 aa)    
Predicted Functional Partners:
AHY47990.1
COG:COG0662: Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]; Pfam:PF01050:Mannose-6-phosphate isomerase, type II, C-terminal; Pfam:PF01050:Mannose-6-phosphate isomerase, type II, C-terminal; SUPERFAMILY:SSF51182:RmlC-like cupin domain.
       0.746
AHY47984.1
Phosphotransferase enzyme family; COG:COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]; Pfam:PF01636:Aminoglycoside phosphotransferase; SUPERFAMILY:SSF56112:Protein kinase-like domain.
       0.477
AHY47985.1
Phosphotransferase enzyme family; COG:COG3173: Predicted aminoglycoside phosphotransferase [General function prediction only]; Pfam:PF01636:Aminoglycoside phosphotransferase; SUPERFAMILY:SSF56112:Protein kinase-like domain.
       0.477
AHY47986.1
COG:COG1132: ABC-type multidrug transport system ATPase and permease components [Defense mechanisms]; Pfam:PF00664:ABC transporter, transmembrane domain; Pfam:PF00664:ABC transporter, transmembrane domain; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
       0.477
AHY47987.1
COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description.
       0.477
AHY47988.1
Glycosyl transferases group 1; COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description.
       0.477
AHY47989.1
COG:COG4671: Predicted glycosyl transferase [General function prediction only]; Pfam:PF04101:Glycosyl transferase, family 28, C-terminal; Pfam:PF04101:Glycosyl transferase, family 28, C-terminal; SUPERFAMILY:SSF53756:No Description.
       0.477
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.